Gene : Cagra.3648s0003 C. grandiflora v1.1
Defline:  (1 of 10) 1.1.1.1 - Alcohol dehydrogenase / Aldehyde reductase Genomic Order:  3
Name:  ? Cagra.3648s0003 Secondary Identifier:  ? PAC:28919128
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5486 Capsella grandiflora pathologic  
Cgrandiflora PWY-5751 Capsella grandiflora pathologic  
Cgrandiflora PWY-6333 Capsella grandiflora pathologic  
Cgrandiflora PWY66-21 Capsella grandiflora pathologic  
Cgrandiflora PWY66-389 Capsella grandiflora pathologic  
Cgrandiflora PWY-6802 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3648s0003 0.5kb upstream 0.5kb upstream 981 true Scaffold3648: 9929-10909 Capsella grandiflora
Cagra.3648s0003 0.5kb upstream 0.5kb upstream 218 false Scaffold3648: 10692-10909 Capsella grandiflora
Cagra.3648s0003 0.5kb downstream 0.5kb downstream 1263 true Scaffold3648: 9429-10691 Capsella grandiflora
Cagra.3648s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold3648: 9429-9928 Capsella grandiflora
Cagra.3648s0003 1.0kb upstream 1.0kb upstream 981 true Scaffold3648: 9929-10909 Capsella grandiflora
Cagra.3648s0003 1.0kb upstream 1.0kb upstream 218 false Scaffold3648: 10692-10909 Capsella grandiflora
Cagra.3648s0003 1.0kb downstream 1.0kb downstream 1763 true Scaffold3648: 8929-10691 Capsella grandiflora
Cagra.3648s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold3648: 8929-9928 Capsella grandiflora
Cagra.3648s0003 2.0kb upstream 2.0kb upstream 981 true Scaffold3648: 9929-10909 Capsella grandiflora
Cagra.3648s0003 2.0kb upstream 2.0kb upstream 218 false Scaffold3648: 10692-10909 Capsella grandiflora
Cagra.3648s0003 2.0kb downstream 2.0kb downstream 2763 true Scaffold3648: 7929-10691 Capsella grandiflora
Cagra.3648s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold3648: 7929-9928 Capsella grandiflora
Cagra.3648s0003 5.0kb upstream 5.0kb upstream 981 true Scaffold3648: 9929-10909 Capsella grandiflora
Cagra.3648s0003 5.0kb upstream 5.0kb upstream 218 false Scaffold3648: 10692-10909 Capsella grandiflora
Cagra.3648s0003 5.0kb downstream 5.0kb downstream 5763 true Scaffold3648: 4929-10691 Capsella grandiflora
Cagra.3648s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold3648: 4929-9928 Capsella grandiflora
Cagra.3648s0003 10.0kb upstream 10.0kb upstream 981 true Scaffold3648: 9929-10909 Capsella grandiflora
Cagra.3648s0003 10.0kb upstream 10.0kb upstream 218 false Scaffold3648: 10692-10909 Capsella grandiflora
Cagra.3648s0003 10.0kb downstream 10.0kb downstream 10691 true Scaffold3648: 1-10691 Capsella grandiflora
Cagra.3648s0003 10.0kb downstream 10.0kb downstream 9928 false Scaffold3648: 1-9928 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379934 5261 Brassicaceae View MSA
123802488 5264 Brassicales-Malvales View MSA
124299679 5266 SBM View MSA
124251404 5268 Malvidae View MSA
124074336 5270 Rosid View MSA
123753594 5271 Pentapetalae View MSA
122797386 5272 Eudicot View MSA
122050713 5273 Angiosperm View MSA
121350624 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain