Gene : Cagra.3652s0004 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10766//PTHR10766:SF58 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN Genomic Order:  4
Name:  ? Cagra.3652s0004 Secondary Identifier:  ? PAC:28914772
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3652s0004 0.5kb upstream 0.5kb upstream 3390 true Scaffold3652: 16734-20123 Capsella grandiflora
Cagra.3652s0004 0.5kb upstream 0.5kb upstream 2 false Scaffold3652: 20122-20123 Capsella grandiflora
Cagra.3652s0004 0.5kb downstream 0.5kb downstream 3888 true Scaffold3652: 16234-20121 Capsella grandiflora
Cagra.3652s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold3652: 16234-16733 Capsella grandiflora
Cagra.3652s0004 1.0kb upstream 1.0kb upstream 3390 true Scaffold3652: 16734-20123 Capsella grandiflora
Cagra.3652s0004 1.0kb upstream 1.0kb upstream 2 false Scaffold3652: 20122-20123 Capsella grandiflora
Cagra.3652s0004 1.0kb downstream 1.0kb downstream 4388 true Scaffold3652: 15734-20121 Capsella grandiflora
Cagra.3652s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold3652: 15734-16733 Capsella grandiflora
Cagra.3652s0004 2.0kb upstream 2.0kb upstream 3390 true Scaffold3652: 16734-20123 Capsella grandiflora
Cagra.3652s0004 2.0kb upstream 2.0kb upstream 2 false Scaffold3652: 20122-20123 Capsella grandiflora
Cagra.3652s0004 2.0kb downstream 2.0kb downstream 5388 true Scaffold3652: 14734-20121 Capsella grandiflora
Cagra.3652s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold3652: 14734-16733 Capsella grandiflora
Cagra.3652s0004 5.0kb upstream 5.0kb upstream 3390 true Scaffold3652: 16734-20123 Capsella grandiflora
Cagra.3652s0004 5.0kb upstream 5.0kb upstream 2 false Scaffold3652: 20122-20123 Capsella grandiflora
Cagra.3652s0004 5.0kb downstream 5.0kb downstream 8388 true Scaffold3652: 11734-20121 Capsella grandiflora
Cagra.3652s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold3652: 11734-16733 Capsella grandiflora
Cagra.3652s0004 10.0kb upstream 10.0kb upstream 3390 true Scaffold3652: 16734-20123 Capsella grandiflora
Cagra.3652s0004 10.0kb upstream 10.0kb upstream 2 false Scaffold3652: 20122-20123 Capsella grandiflora
Cagra.3652s0004 10.0kb downstream 10.0kb downstream 13388 true Scaffold3652: 6734-20121 Capsella grandiflora
Cagra.3652s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold3652: 6734-16733 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376695 5261 Brassicaceae View MSA
123835811 5264 Brassicales-Malvales View MSA
124322091 5266 SBM View MSA
124253929 5268 Malvidae View MSA
124069153 5270 Rosid View MSA
123738097 5271 Pentapetalae View MSA
122788164 5272 Eudicot View MSA
122049966 5273 Angiosperm View MSA
121347784 5274 Embryophyte View MSA
123425763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain