Gene : Cagra.3675s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13994:SF9 - NUDIX HYDROLASE 8 Genomic Order:  5
Name:  ? Cagra.3675s0005 Secondary Identifier:  ? PAC:28900848
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5381 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3675s0005 0.5kb upstream 0.5kb upstream 2422 true Scaffold3675: 10705-13126 Capsella grandiflora
Cagra.3675s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold3675: 12627-13126 Capsella grandiflora
Cagra.3675s0005 0.5kb downstream 0.5kb downstream 2422 true Scaffold3675: 10205-12626 Capsella grandiflora
Cagra.3675s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold3675: 10205-10704 Capsella grandiflora
Cagra.3675s0005 1.0kb upstream 1.0kb upstream 2922 true Scaffold3675: 10705-13626 Capsella grandiflora
Cagra.3675s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold3675: 12627-13626 Capsella grandiflora
Cagra.3675s0005 1.0kb downstream 1.0kb downstream 2922 true Scaffold3675: 9705-12626 Capsella grandiflora
Cagra.3675s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold3675: 9705-10704 Capsella grandiflora
Cagra.3675s0005 2.0kb upstream 2.0kb upstream 3922 true Scaffold3675: 10705-14626 Capsella grandiflora
Cagra.3675s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold3675: 12627-14626 Capsella grandiflora
Cagra.3675s0005 2.0kb downstream 2.0kb downstream 3922 true Scaffold3675: 8705-12626 Capsella grandiflora
Cagra.3675s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold3675: 8705-10704 Capsella grandiflora
Cagra.3675s0005 5.0kb upstream 5.0kb upstream 6922 true Scaffold3675: 10705-17626 Capsella grandiflora
Cagra.3675s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold3675: 12627-17626 Capsella grandiflora
Cagra.3675s0005 5.0kb downstream 5.0kb downstream 6922 true Scaffold3675: 5705-12626 Capsella grandiflora
Cagra.3675s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold3675: 5705-10704 Capsella grandiflora
Cagra.3675s0005 10.0kb upstream 10.0kb upstream 11922 true Scaffold3675: 10705-22626 Capsella grandiflora
Cagra.3675s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold3675: 12627-22626 Capsella grandiflora
Cagra.3675s0005 10.0kb downstream 10.0kb downstream 11922 true Scaffold3675: 705-12626 Capsella grandiflora
Cagra.3675s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold3675: 705-10704 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369206 5261 Brassicaceae View MSA
123828958 5264 Brassicales-Malvales View MSA
124337528 5266 SBM View MSA
124238043 5268 Malvidae View MSA
124050440 5270 Rosid View MSA
123741366 5271 Pentapetalae View MSA
122785927 5272 Eudicot View MSA
122049902 5273 Angiosperm View MSA
121347954 5274 Embryophyte View MSA
123428722 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain