Gene : Cagra.3694s0005 C. grandiflora v1.1
Defline:  (1 of 1) 4.1.1.39 - Ribulose-bisphosphate carboxylase / RuBP carboxylase Genomic Order:  5
Name:  ? Cagra.3694s0005 Secondary Identifier:  ? PAC:28908245
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora CALVIN-PWY Capsella grandiflora pathologic  
Cgrandiflora PHOTOALL-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-5723 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3694s0005 0.5kb upstream 0.5kb upstream 1305 true Scaffold3694: 21686-22990 Capsella grandiflora
Cagra.3694s0005 0.5kb upstream 0.5kb upstream 323 false Scaffold3694: 22668-22990 Capsella grandiflora
Cagra.3694s0005 0.5kb downstream 0.5kb downstream 1482 true Scaffold3694: 21186-22667 Capsella grandiflora
Cagra.3694s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold3694: 21186-21685 Capsella grandiflora
Cagra.3694s0005 1.0kb upstream 1.0kb upstream 1305 true Scaffold3694: 21686-22990 Capsella grandiflora
Cagra.3694s0005 1.0kb upstream 1.0kb upstream 323 false Scaffold3694: 22668-22990 Capsella grandiflora
Cagra.3694s0005 1.0kb downstream 1.0kb downstream 1982 true Scaffold3694: 20686-22667 Capsella grandiflora
Cagra.3694s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold3694: 20686-21685 Capsella grandiflora
Cagra.3694s0005 2.0kb upstream 2.0kb upstream 1305 true Scaffold3694: 21686-22990 Capsella grandiflora
Cagra.3694s0005 2.0kb upstream 2.0kb upstream 323 false Scaffold3694: 22668-22990 Capsella grandiflora
Cagra.3694s0005 2.0kb downstream 2.0kb downstream 2982 true Scaffold3694: 19686-22667 Capsella grandiflora
Cagra.3694s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold3694: 19686-21685 Capsella grandiflora
Cagra.3694s0005 5.0kb upstream 5.0kb upstream 1305 true Scaffold3694: 21686-22990 Capsella grandiflora
Cagra.3694s0005 5.0kb upstream 5.0kb upstream 323 false Scaffold3694: 22668-22990 Capsella grandiflora
Cagra.3694s0005 5.0kb downstream 5.0kb downstream 5982 true Scaffold3694: 16686-22667 Capsella grandiflora
Cagra.3694s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold3694: 16686-21685 Capsella grandiflora
Cagra.3694s0005 10.0kb upstream 10.0kb upstream 1305 true Scaffold3694: 21686-22990 Capsella grandiflora
Cagra.3694s0005 10.0kb upstream 10.0kb upstream 323 false Scaffold3694: 22668-22990 Capsella grandiflora
Cagra.3694s0005 10.0kb downstream 10.0kb downstream 10982 true Scaffold3694: 11686-22667 Capsella grandiflora
Cagra.3694s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold3694: 11686-21685 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380509 5261 Brassicaceae View MSA
123836682 5264 Brassicales-Malvales View MSA
124340616 5266 SBM View MSA
124250367 5268 Malvidae View MSA
124066802 5270 Rosid View MSA
123747186 5271 Pentapetalae View MSA
122796864 5272 Eudicot View MSA
122046951 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain