Gene : Cagra.3704s0002 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11014:SF55 - IAA-AMINO ACID HYDROLASE ILR1-LIKE 1-RELATED Genomic Order:  2
Name:  ? Cagra.3704s0002 Secondary Identifier:  ? PAC:28919106
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3704s0002 0.5kb upstream 0.5kb upstream 2394 true Scaffold3704: 4180-6573 Capsella grandiflora
Cagra.3704s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold3704: 4180-4679 Capsella grandiflora
Cagra.3704s0002 0.5kb downstream 0.5kb downstream 2394 true Scaffold3704: 4680-7073 Capsella grandiflora
Cagra.3704s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold3704: 6574-7073 Capsella grandiflora
Cagra.3704s0002 1.0kb upstream 1.0kb upstream 2894 true Scaffold3704: 3680-6573 Capsella grandiflora
Cagra.3704s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold3704: 3680-4679 Capsella grandiflora
Cagra.3704s0002 1.0kb downstream 1.0kb downstream 2894 true Scaffold3704: 4680-7573 Capsella grandiflora
Cagra.3704s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold3704: 6574-7573 Capsella grandiflora
Cagra.3704s0002 2.0kb upstream 2.0kb upstream 3894 true Scaffold3704: 2680-6573 Capsella grandiflora
Cagra.3704s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold3704: 2680-4679 Capsella grandiflora
Cagra.3704s0002 2.0kb downstream 2.0kb downstream 3894 true Scaffold3704: 4680-8573 Capsella grandiflora
Cagra.3704s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold3704: 6574-8573 Capsella grandiflora
Cagra.3704s0002 5.0kb upstream 5.0kb upstream 6573 true Scaffold3704: 1-6573 Capsella grandiflora
Cagra.3704s0002 5.0kb upstream 5.0kb upstream 4679 false Scaffold3704: 1-4679 Capsella grandiflora
Cagra.3704s0002 5.0kb downstream 5.0kb downstream 6894 true Scaffold3704: 4680-11573 Capsella grandiflora
Cagra.3704s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold3704: 6574-11573 Capsella grandiflora
Cagra.3704s0002 10.0kb upstream 10.0kb upstream 6573 true Scaffold3704: 1-6573 Capsella grandiflora
Cagra.3704s0002 10.0kb upstream 10.0kb upstream 4679 false Scaffold3704: 1-4679 Capsella grandiflora
Cagra.3704s0002 10.0kb downstream 10.0kb downstream 11894 true Scaffold3704: 4680-16573 Capsella grandiflora
Cagra.3704s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold3704: 6574-16573 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373614 5261 Brassicaceae View MSA
123830760 5264 Brassicales-Malvales View MSA
124337855 5266 SBM View MSA
124243641 5268 Malvidae View MSA
124073280 5270 Rosid View MSA
123745174 5271 Pentapetalae View MSA
122790280 5272 Eudicot View MSA
122042438 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain