Gene : Cagra.3696s0016 C. grandiflora v1.1
Genomic Order:  16 Name:  ? Cagra.3696s0016
Secondary Identifier:  ? PAC:28913593
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3696s0016 0.5kb upstream 0.5kb upstream 3184 true Scaffold3696: 70107-73290 Capsella grandiflora
Cagra.3696s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold3696: 72791-73290 Capsella grandiflora
Cagra.3696s0016 0.5kb downstream 0.5kb downstream 3184 true Scaffold3696: 69607-72790 Capsella grandiflora
Cagra.3696s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold3696: 69607-70106 Capsella grandiflora
Cagra.3696s0016 1.0kb upstream 1.0kb upstream 3684 true Scaffold3696: 70107-73790 Capsella grandiflora
Cagra.3696s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold3696: 72791-73790 Capsella grandiflora
Cagra.3696s0016 1.0kb downstream 1.0kb downstream 3684 true Scaffold3696: 69107-72790 Capsella grandiflora
Cagra.3696s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold3696: 69107-70106 Capsella grandiflora
Cagra.3696s0016 2.0kb upstream 2.0kb upstream 4684 true Scaffold3696: 70107-74790 Capsella grandiflora
Cagra.3696s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold3696: 72791-74790 Capsella grandiflora
Cagra.3696s0016 2.0kb downstream 2.0kb downstream 4684 true Scaffold3696: 68107-72790 Capsella grandiflora
Cagra.3696s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold3696: 68107-70106 Capsella grandiflora
Cagra.3696s0016 5.0kb upstream 5.0kb upstream 7684 true Scaffold3696: 70107-77790 Capsella grandiflora
Cagra.3696s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold3696: 72791-77790 Capsella grandiflora
Cagra.3696s0016 5.0kb downstream 5.0kb downstream 7684 true Scaffold3696: 65107-72790 Capsella grandiflora
Cagra.3696s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold3696: 65107-70106 Capsella grandiflora
Cagra.3696s0016 10.0kb upstream 10.0kb upstream 12684 true Scaffold3696: 70107-82790 Capsella grandiflora
Cagra.3696s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold3696: 72791-82790 Capsella grandiflora
Cagra.3696s0016 10.0kb downstream 10.0kb downstream 12684 true Scaffold3696: 60107-72790 Capsella grandiflora
Cagra.3696s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold3696: 60107-70106 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375807 5261 Brassicaceae View MSA
123840362 5264 Brassicales-Malvales View MSA
124340487 5266 SBM View MSA
124245797 5268 Malvidae View MSA
124063502 5270 Rosid View MSA
123746893 5271 Pentapetalae View MSA
122791489 5272 Eudicot View MSA
122045996 5273 Angiosperm View MSA
121344407 5274 Embryophyte View MSA
123380038 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain