Gene : Cagra.3542s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11886//PTHR11886:SF51 - DYNEIN LIGHT CHAIN Genomic Order:  5
Name:  ? Cagra.3542s0005 Secondary Identifier:  ? PAC:28914527
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3542s0005 0.5kb upstream 0.5kb upstream 2313 true Scaffold3542: 10308-12620 Capsella grandiflora
Cagra.3542s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold3542: 10308-10807 Capsella grandiflora
Cagra.3542s0005 0.5kb downstream 0.5kb downstream 2313 true Scaffold3542: 10808-13120 Capsella grandiflora
Cagra.3542s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold3542: 12621-13120 Capsella grandiflora
Cagra.3542s0005 1.0kb upstream 1.0kb upstream 2813 true Scaffold3542: 9808-12620 Capsella grandiflora
Cagra.3542s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold3542: 9808-10807 Capsella grandiflora
Cagra.3542s0005 1.0kb downstream 1.0kb downstream 2813 true Scaffold3542: 10808-13620 Capsella grandiflora
Cagra.3542s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold3542: 12621-13620 Capsella grandiflora
Cagra.3542s0005 2.0kb upstream 2.0kb upstream 3813 true Scaffold3542: 8808-12620 Capsella grandiflora
Cagra.3542s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold3542: 8808-10807 Capsella grandiflora
Cagra.3542s0005 2.0kb downstream 2.0kb downstream 3813 true Scaffold3542: 10808-14620 Capsella grandiflora
Cagra.3542s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold3542: 12621-14620 Capsella grandiflora
Cagra.3542s0005 5.0kb upstream 5.0kb upstream 6813 true Scaffold3542: 5808-12620 Capsella grandiflora
Cagra.3542s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold3542: 5808-10807 Capsella grandiflora
Cagra.3542s0005 5.0kb downstream 5.0kb downstream 6813 true Scaffold3542: 10808-17620 Capsella grandiflora
Cagra.3542s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold3542: 12621-17620 Capsella grandiflora
Cagra.3542s0005 10.0kb upstream 10.0kb upstream 11813 true Scaffold3542: 808-12620 Capsella grandiflora
Cagra.3542s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold3542: 808-10807 Capsella grandiflora
Cagra.3542s0005 10.0kb downstream 10.0kb downstream 11813 true Scaffold3542: 10808-22620 Capsella grandiflora
Cagra.3542s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold3542: 12621-22620 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367948 5261 Brassicaceae View MSA
123835800 5264 Brassicales-Malvales View MSA
124341172 5266 SBM View MSA
124243825 5268 Malvidae View MSA
124066792 5270 Rosid View MSA
123747752 5271 Pentapetalae View MSA
122794062 5272 Eudicot View MSA
122048420 5273 Angiosperm View MSA
121310962 5274 Embryophyte View MSA
123348328 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain