Gene : Cagra.3534s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31003:SF7 - F14J22.20 PROTEIN Genomic Order:  2
Name:  ? Cagra.3534s0002 Secondary Identifier:  ? PAC:28898204
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3534s0002 0.5kb upstream 0.5kb upstream 2186 true Scaffold3534: 15322-17507 Capsella grandiflora
Cagra.3534s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold3534: 15322-15821 Capsella grandiflora
Cagra.3534s0002 0.5kb downstream 0.5kb downstream 2186 true Scaffold3534: 15822-18007 Capsella grandiflora
Cagra.3534s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold3534: 17508-18007 Capsella grandiflora
Cagra.3534s0002 1.0kb upstream 1.0kb upstream 2686 true Scaffold3534: 14822-17507 Capsella grandiflora
Cagra.3534s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold3534: 14822-15821 Capsella grandiflora
Cagra.3534s0002 1.0kb downstream 1.0kb downstream 2686 true Scaffold3534: 15822-18507 Capsella grandiflora
Cagra.3534s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold3534: 17508-18507 Capsella grandiflora
Cagra.3534s0002 2.0kb upstream 2.0kb upstream 3686 true Scaffold3534: 13822-17507 Capsella grandiflora
Cagra.3534s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold3534: 13822-15821 Capsella grandiflora
Cagra.3534s0002 2.0kb downstream 2.0kb downstream 3565 true Scaffold3534: 15822-19386 Capsella grandiflora
Cagra.3534s0002 2.0kb downstream 2.0kb downstream 1879 false Scaffold3534: 17508-19386 Capsella grandiflora
Cagra.3534s0002 5.0kb upstream 5.0kb upstream 6686 true Scaffold3534: 10822-17507 Capsella grandiflora
Cagra.3534s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold3534: 10822-15821 Capsella grandiflora
Cagra.3534s0002 5.0kb downstream 5.0kb downstream 3565 true Scaffold3534: 15822-19386 Capsella grandiflora
Cagra.3534s0002 5.0kb downstream 5.0kb downstream 1879 false Scaffold3534: 17508-19386 Capsella grandiflora
Cagra.3534s0002 10.0kb upstream 10.0kb upstream 11686 true Scaffold3534: 5822-17507 Capsella grandiflora
Cagra.3534s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold3534: 5822-15821 Capsella grandiflora
Cagra.3534s0002 10.0kb downstream 10.0kb downstream 3565 true Scaffold3534: 15822-19386 Capsella grandiflora
Cagra.3534s0002 10.0kb downstream 10.0kb downstream 1879 false Scaffold3534: 17508-19386 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370891 5261 Brassicaceae View MSA
123840622 5264 Brassicales-Malvales View MSA
124348347 5266 SBM View MSA
124251556 5268 Malvidae View MSA
124070700 5270 Rosid View MSA
123742212 5271 Pentapetalae View MSA
122792121 5272 Eudicot View MSA
122049766 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain