Gene : Cagra.3568s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR16465 - NUCLEASE-RELATED Genomic Order:  2
Name:  ? Cagra.3568s0002 Secondary Identifier:  ? PAC:28905244
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3568s0002 0.5kb upstream 0.5kb upstream 1657 true Scaffold3568: 16416-18072 Capsella grandiflora
Cagra.3568s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold3568: 17573-18072 Capsella grandiflora
Cagra.3568s0002 0.5kb downstream 0.5kb downstream 1657 true Scaffold3568: 15916-17572 Capsella grandiflora
Cagra.3568s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold3568: 15916-16415 Capsella grandiflora
Cagra.3568s0002 1.0kb upstream 1.0kb upstream 2157 true Scaffold3568: 16416-18572 Capsella grandiflora
Cagra.3568s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold3568: 17573-18572 Capsella grandiflora
Cagra.3568s0002 1.0kb downstream 1.0kb downstream 2157 true Scaffold3568: 15416-17572 Capsella grandiflora
Cagra.3568s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold3568: 15416-16415 Capsella grandiflora
Cagra.3568s0002 2.0kb upstream 2.0kb upstream 3157 true Scaffold3568: 16416-19572 Capsella grandiflora
Cagra.3568s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold3568: 17573-19572 Capsella grandiflora
Cagra.3568s0002 2.0kb downstream 2.0kb downstream 3157 true Scaffold3568: 14416-17572 Capsella grandiflora
Cagra.3568s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold3568: 14416-16415 Capsella grandiflora
Cagra.3568s0002 5.0kb upstream 5.0kb upstream 6157 true Scaffold3568: 16416-22572 Capsella grandiflora
Cagra.3568s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold3568: 17573-22572 Capsella grandiflora
Cagra.3568s0002 5.0kb downstream 5.0kb downstream 6157 true Scaffold3568: 11416-17572 Capsella grandiflora
Cagra.3568s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold3568: 11416-16415 Capsella grandiflora
Cagra.3568s0002 10.0kb upstream 10.0kb upstream 11157 true Scaffold3568: 16416-27572 Capsella grandiflora
Cagra.3568s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold3568: 17573-27572 Capsella grandiflora
Cagra.3568s0002 10.0kb downstream 10.0kb downstream 11157 true Scaffold3568: 6416-17572 Capsella grandiflora
Cagra.3568s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold3568: 6416-16415 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370744 5261 Brassicaceae View MSA
123831027 5264 Brassicales-Malvales View MSA
124344505 5266 SBM View MSA
124238271 5268 Malvidae View MSA
124062249 5270 Rosid View MSA
123737292 5271 Pentapetalae View MSA
122790425 5272 Eudicot View MSA
122049396 5273 Angiosperm View MSA
121346346 5274 Embryophyte View MSA
123380370 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain