Gene : Cagra.3598s0015 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23240:SF6 - DNA CROSS-LINK REPAIR 1A PROTEIN Genomic Order:  15
Name:  ? Cagra.3598s0015 Secondary Identifier:  ? PAC:28906428
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3598s0015 0.5kb upstream 0.5kb upstream 3823 true Scaffold3598: 47639-51461 Capsella grandiflora
Cagra.3598s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold3598: 47639-48138 Capsella grandiflora
Cagra.3598s0015 0.5kb downstream 0.5kb downstream 3823 true Scaffold3598: 48139-51961 Capsella grandiflora
Cagra.3598s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold3598: 51462-51961 Capsella grandiflora
Cagra.3598s0015 1.0kb upstream 1.0kb upstream 4323 true Scaffold3598: 47139-51461 Capsella grandiflora
Cagra.3598s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold3598: 47139-48138 Capsella grandiflora
Cagra.3598s0015 1.0kb downstream 1.0kb downstream 4323 true Scaffold3598: 48139-52461 Capsella grandiflora
Cagra.3598s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold3598: 51462-52461 Capsella grandiflora
Cagra.3598s0015 2.0kb upstream 2.0kb upstream 5323 true Scaffold3598: 46139-51461 Capsella grandiflora
Cagra.3598s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold3598: 46139-48138 Capsella grandiflora
Cagra.3598s0015 2.0kb downstream 2.0kb downstream 5323 true Scaffold3598: 48139-53461 Capsella grandiflora
Cagra.3598s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold3598: 51462-53461 Capsella grandiflora
Cagra.3598s0015 5.0kb upstream 5.0kb upstream 8323 true Scaffold3598: 43139-51461 Capsella grandiflora
Cagra.3598s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold3598: 43139-48138 Capsella grandiflora
Cagra.3598s0015 5.0kb downstream 5.0kb downstream 8323 true Scaffold3598: 48139-56461 Capsella grandiflora
Cagra.3598s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold3598: 51462-56461 Capsella grandiflora
Cagra.3598s0015 10.0kb upstream 10.0kb upstream 13323 true Scaffold3598: 38139-51461 Capsella grandiflora
Cagra.3598s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold3598: 38139-48138 Capsella grandiflora
Cagra.3598s0015 10.0kb downstream 10.0kb downstream 13323 true Scaffold3598: 48139-61461 Capsella grandiflora
Cagra.3598s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold3598: 51462-61461 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373067 5261 Brassicaceae View MSA
123829319 5264 Brassicales-Malvales View MSA
124338461 5266 SBM View MSA
124248628 5268 Malvidae View MSA
124073622 5270 Rosid View MSA
123741645 5271 Pentapetalae View MSA
122793173 5272 Eudicot View MSA
122046861 5273 Angiosperm View MSA
121351448 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain