Gene : Cagra.3628s0001 C. grandiflora v1.1
Defline:  (1 of 4) PTHR18952:SF111 - ALPHA CARBONIC ANHYDRASE 3 Genomic Order:  1
Name:  ? Cagra.3628s0001 Secondary Identifier:  ? PAC:28900538
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora CYANCAT-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-241 Capsella grandiflora pathologic  
Cgrandiflora PWY-7115 Capsella grandiflora pathologic  
Cgrandiflora PWY-7117 Capsella grandiflora pathologic  
Cgrandiflora PWYQT-4429 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3628s0001 0.5kb upstream 0.5kb upstream 2172 true Scaffold3628: 1541-3712 Capsella grandiflora
Cagra.3628s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold3628: 1541-2040 Capsella grandiflora
Cagra.3628s0001 0.5kb downstream 0.5kb downstream 2172 true Scaffold3628: 2041-4212 Capsella grandiflora
Cagra.3628s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold3628: 3713-4212 Capsella grandiflora
Cagra.3628s0001 1.0kb upstream 1.0kb upstream 2672 true Scaffold3628: 1041-3712 Capsella grandiflora
Cagra.3628s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold3628: 1041-2040 Capsella grandiflora
Cagra.3628s0001 1.0kb downstream 1.0kb downstream 2672 true Scaffold3628: 2041-4712 Capsella grandiflora
Cagra.3628s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold3628: 3713-4712 Capsella grandiflora
Cagra.3628s0001 2.0kb upstream 2.0kb upstream 3672 true Scaffold3628: 41-3712 Capsella grandiflora
Cagra.3628s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold3628: 41-2040 Capsella grandiflora
Cagra.3628s0001 2.0kb downstream 2.0kb downstream 3672 true Scaffold3628: 2041-5712 Capsella grandiflora
Cagra.3628s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold3628: 3713-5712 Capsella grandiflora
Cagra.3628s0001 5.0kb upstream 5.0kb upstream 3712 true Scaffold3628: 1-3712 Capsella grandiflora
Cagra.3628s0001 5.0kb upstream 5.0kb upstream 2040 false Scaffold3628: 1-2040 Capsella grandiflora
Cagra.3628s0001 5.0kb downstream 5.0kb downstream 6672 true Scaffold3628: 2041-8712 Capsella grandiflora
Cagra.3628s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold3628: 3713-8712 Capsella grandiflora
Cagra.3628s0001 10.0kb upstream 10.0kb upstream 3712 true Scaffold3628: 1-3712 Capsella grandiflora
Cagra.3628s0001 10.0kb upstream 10.0kb upstream 2040 false Scaffold3628: 1-2040 Capsella grandiflora
Cagra.3628s0001 10.0kb downstream 10.0kb downstream 11672 true Scaffold3628: 2041-13712 Capsella grandiflora
Cagra.3628s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold3628: 3713-13712 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380316 5261 Brassicaceae View MSA
123838880 5264 Brassicales-Malvales View MSA
124350350 5266 SBM View MSA
124244340 5268 Malvidae View MSA
124071031 5270 Rosid View MSA
123753559 5271 Pentapetalae View MSA
122795540 5272 Eudicot View MSA
122047303 5273 Angiosperm View MSA
121351630 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain