Gene : Cagra.3598s0020 C. grandiflora v1.1
Defline:  (1 of 32) PF00097 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) Genomic Order:  20
Name:  ? Cagra.3598s0020 Secondary Identifier:  ? PAC:28906418
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3598s0020 0.5kb upstream 0.5kb upstream 3501 true Scaffold3598: 71565-75065 Capsella grandiflora
Cagra.3598s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold3598: 71565-72064 Capsella grandiflora
Cagra.3598s0020 0.5kb downstream 0.5kb downstream 3002 true Scaffold3598: 72065-75066 Capsella grandiflora
Cagra.3598s0020 0.5kb downstream 0.5kb downstream 1 false Scaffold3598: 75066-75066 Capsella grandiflora
Cagra.3598s0020 1.0kb upstream 1.0kb upstream 4001 true Scaffold3598: 71065-75065 Capsella grandiflora
Cagra.3598s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold3598: 71065-72064 Capsella grandiflora
Cagra.3598s0020 1.0kb downstream 1.0kb downstream 3002 true Scaffold3598: 72065-75066 Capsella grandiflora
Cagra.3598s0020 1.0kb downstream 1.0kb downstream 1 false Scaffold3598: 75066-75066 Capsella grandiflora
Cagra.3598s0020 2.0kb upstream 2.0kb upstream 5001 true Scaffold3598: 70065-75065 Capsella grandiflora
Cagra.3598s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold3598: 70065-72064 Capsella grandiflora
Cagra.3598s0020 2.0kb downstream 2.0kb downstream 3002 true Scaffold3598: 72065-75066 Capsella grandiflora
Cagra.3598s0020 2.0kb downstream 2.0kb downstream 1 false Scaffold3598: 75066-75066 Capsella grandiflora
Cagra.3598s0020 5.0kb upstream 5.0kb upstream 8001 true Scaffold3598: 67065-75065 Capsella grandiflora
Cagra.3598s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold3598: 67065-72064 Capsella grandiflora
Cagra.3598s0020 5.0kb downstream 5.0kb downstream 3002 true Scaffold3598: 72065-75066 Capsella grandiflora
Cagra.3598s0020 5.0kb downstream 5.0kb downstream 1 false Scaffold3598: 75066-75066 Capsella grandiflora
Cagra.3598s0020 10.0kb upstream 10.0kb upstream 13001 true Scaffold3598: 62065-75065 Capsella grandiflora
Cagra.3598s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold3598: 62065-72064 Capsella grandiflora
Cagra.3598s0020 10.0kb downstream 10.0kb downstream 3002 true Scaffold3598: 72065-75066 Capsella grandiflora
Cagra.3598s0020 10.0kb downstream 10.0kb downstream 1 false Scaffold3598: 75066-75066 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333605 5261 Brassicaceae Singleton cluster - no MSA
123837809 5264 Brassicales-Malvales View MSA
124341668 5266 SBM View MSA
124243095 5268 Malvidae View MSA
124060786 5270 Rosid View MSA
123742061 5271 Pentapetalae View MSA
122793495 5272 Eudicot View MSA
122042542 5273 Angiosperm View MSA
121344560 5274 Embryophyte View MSA
123423758 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain