Gene : Cagra.3527s0043 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11328//PTHR11328:SF34 - MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN Genomic Order:  43
Name:  ? Cagra.3527s0043 Secondary Identifier:  ? PAC:28898541
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3527s0043 0.5kb upstream 0.5kb upstream 3850 true Scaffold3527: 173123-176972 Capsella grandiflora
Cagra.3527s0043 0.5kb upstream 0.5kb upstream 500 false Scaffold3527: 173123-173622 Capsella grandiflora
Cagra.3527s0043 0.5kb downstream 0.5kb downstream 3850 true Scaffold3527: 173623-177472 Capsella grandiflora
Cagra.3527s0043 0.5kb downstream 0.5kb downstream 500 false Scaffold3527: 176973-177472 Capsella grandiflora
Cagra.3527s0043 1.0kb upstream 1.0kb upstream 4350 true Scaffold3527: 172623-176972 Capsella grandiflora
Cagra.3527s0043 1.0kb upstream 1.0kb upstream 1000 false Scaffold3527: 172623-173622 Capsella grandiflora
Cagra.3527s0043 1.0kb downstream 1.0kb downstream 4350 true Scaffold3527: 173623-177972 Capsella grandiflora
Cagra.3527s0043 1.0kb downstream 1.0kb downstream 1000 false Scaffold3527: 176973-177972 Capsella grandiflora
Cagra.3527s0043 2.0kb upstream 2.0kb upstream 5350 true Scaffold3527: 171623-176972 Capsella grandiflora
Cagra.3527s0043 2.0kb upstream 2.0kb upstream 2000 false Scaffold3527: 171623-173622 Capsella grandiflora
Cagra.3527s0043 2.0kb downstream 2.0kb downstream 5350 true Scaffold3527: 173623-178972 Capsella grandiflora
Cagra.3527s0043 2.0kb downstream 2.0kb downstream 2000 false Scaffold3527: 176973-178972 Capsella grandiflora
Cagra.3527s0043 5.0kb upstream 5.0kb upstream 8350 true Scaffold3527: 168623-176972 Capsella grandiflora
Cagra.3527s0043 5.0kb upstream 5.0kb upstream 5000 false Scaffold3527: 168623-173622 Capsella grandiflora
Cagra.3527s0043 5.0kb downstream 5.0kb downstream 8350 true Scaffold3527: 173623-181972 Capsella grandiflora
Cagra.3527s0043 5.0kb downstream 5.0kb downstream 5000 false Scaffold3527: 176973-181972 Capsella grandiflora
Cagra.3527s0043 10.0kb upstream 10.0kb upstream 13350 true Scaffold3527: 163623-176972 Capsella grandiflora
Cagra.3527s0043 10.0kb upstream 10.0kb upstream 10000 false Scaffold3527: 163623-173622 Capsella grandiflora
Cagra.3527s0043 10.0kb downstream 10.0kb downstream 13350 true Scaffold3527: 173623-186972 Capsella grandiflora
Cagra.3527s0043 10.0kb downstream 10.0kb downstream 10000 false Scaffold3527: 176973-186972 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368565 5261 Brassicaceae View MSA
123836201 5264 Brassicales-Malvales View MSA
124344405 5266 SBM View MSA
124238955 5268 Malvidae View MSA
124071150 5270 Rosid View MSA
123741120 5271 Pentapetalae View MSA
122791797 5272 Eudicot View MSA
122041784 5273 Angiosperm View MSA
121347728 5274 Embryophyte View MSA
123380607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain