Gene : Cagra.3527s0049 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10804:SF9 - METHIONINE AMINOPEPTIDASE 2 Genomic Order:  49
Name:  ? Cagra.3527s0049 Secondary Identifier:  ? PAC:28898552
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3527s0049 0.5kb upstream 0.5kb upstream 3660 true Scaffold3527: 200963-204622 Capsella grandiflora
Cagra.3527s0049 0.5kb upstream 0.5kb upstream 500 false Scaffold3527: 200963-201462 Capsella grandiflora
Cagra.3527s0049 0.5kb downstream 0.5kb downstream 3660 true Scaffold3527: 201463-205122 Capsella grandiflora
Cagra.3527s0049 0.5kb downstream 0.5kb downstream 500 false Scaffold3527: 204623-205122 Capsella grandiflora
Cagra.3527s0049 1.0kb upstream 1.0kb upstream 4160 true Scaffold3527: 200463-204622 Capsella grandiflora
Cagra.3527s0049 1.0kb upstream 1.0kb upstream 1000 false Scaffold3527: 200463-201462 Capsella grandiflora
Cagra.3527s0049 1.0kb downstream 1.0kb downstream 4160 true Scaffold3527: 201463-205622 Capsella grandiflora
Cagra.3527s0049 1.0kb downstream 1.0kb downstream 1000 false Scaffold3527: 204623-205622 Capsella grandiflora
Cagra.3527s0049 2.0kb upstream 2.0kb upstream 5160 true Scaffold3527: 199463-204622 Capsella grandiflora
Cagra.3527s0049 2.0kb upstream 2.0kb upstream 2000 false Scaffold3527: 199463-201462 Capsella grandiflora
Cagra.3527s0049 2.0kb downstream 2.0kb downstream 5160 true Scaffold3527: 201463-206622 Capsella grandiflora
Cagra.3527s0049 2.0kb downstream 2.0kb downstream 2000 false Scaffold3527: 204623-206622 Capsella grandiflora
Cagra.3527s0049 5.0kb upstream 5.0kb upstream 8160 true Scaffold3527: 196463-204622 Capsella grandiflora
Cagra.3527s0049 5.0kb upstream 5.0kb upstream 5000 false Scaffold3527: 196463-201462 Capsella grandiflora
Cagra.3527s0049 5.0kb downstream 5.0kb downstream 8160 true Scaffold3527: 201463-209622 Capsella grandiflora
Cagra.3527s0049 5.0kb downstream 5.0kb downstream 5000 false Scaffold3527: 204623-209622 Capsella grandiflora
Cagra.3527s0049 10.0kb upstream 10.0kb upstream 13160 true Scaffold3527: 191463-204622 Capsella grandiflora
Cagra.3527s0049 10.0kb upstream 10.0kb upstream 10000 false Scaffold3527: 191463-201462 Capsella grandiflora
Cagra.3527s0049 10.0kb downstream 10.0kb downstream 13160 true Scaffold3527: 201463-214622 Capsella grandiflora
Cagra.3527s0049 10.0kb downstream 10.0kb downstream 10000 false Scaffold3527: 204623-214622 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365317 5261 Brassicaceae View MSA
123829915 5264 Brassicales-Malvales View MSA
124345431 5266 SBM View MSA
124251292 5268 Malvidae View MSA
124066616 5270 Rosid View MSA
123741819 5271 Pentapetalae View MSA
122792205 5272 Eudicot View MSA
122044459 5273 Angiosperm View MSA
121345658 5274 Embryophyte View MSA
123424700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain