Gene : Cagra.3527s0060 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22792:SF52 - LA-RELATED PROTEIN 6B Genomic Order:  60
Name:  ? Cagra.3527s0060 Secondary Identifier:  ? PAC:28898560
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3527s0060 0.5kb upstream 0.5kb upstream 3042 true Scaffold3527: 239099-242140 Capsella grandiflora
Cagra.3527s0060 0.5kb upstream 0.5kb upstream 500 false Scaffold3527: 239099-239598 Capsella grandiflora
Cagra.3527s0060 0.5kb downstream 0.5kb downstream 3042 true Scaffold3527: 239599-242640 Capsella grandiflora
Cagra.3527s0060 0.5kb downstream 0.5kb downstream 500 false Scaffold3527: 242141-242640 Capsella grandiflora
Cagra.3527s0060 1.0kb upstream 1.0kb upstream 3542 true Scaffold3527: 238599-242140 Capsella grandiflora
Cagra.3527s0060 1.0kb upstream 1.0kb upstream 1000 false Scaffold3527: 238599-239598 Capsella grandiflora
Cagra.3527s0060 1.0kb downstream 1.0kb downstream 3542 true Scaffold3527: 239599-243140 Capsella grandiflora
Cagra.3527s0060 1.0kb downstream 1.0kb downstream 1000 false Scaffold3527: 242141-243140 Capsella grandiflora
Cagra.3527s0060 2.0kb upstream 2.0kb upstream 4542 true Scaffold3527: 237599-242140 Capsella grandiflora
Cagra.3527s0060 2.0kb upstream 2.0kb upstream 2000 false Scaffold3527: 237599-239598 Capsella grandiflora
Cagra.3527s0060 2.0kb downstream 2.0kb downstream 4542 true Scaffold3527: 239599-244140 Capsella grandiflora
Cagra.3527s0060 2.0kb downstream 2.0kb downstream 2000 false Scaffold3527: 242141-244140 Capsella grandiflora
Cagra.3527s0060 5.0kb upstream 5.0kb upstream 7542 true Scaffold3527: 234599-242140 Capsella grandiflora
Cagra.3527s0060 5.0kb upstream 5.0kb upstream 5000 false Scaffold3527: 234599-239598 Capsella grandiflora
Cagra.3527s0060 5.0kb downstream 5.0kb downstream 7542 true Scaffold3527: 239599-247140 Capsella grandiflora
Cagra.3527s0060 5.0kb downstream 5.0kb downstream 5000 false Scaffold3527: 242141-247140 Capsella grandiflora
Cagra.3527s0060 10.0kb upstream 10.0kb upstream 12542 true Scaffold3527: 229599-242140 Capsella grandiflora
Cagra.3527s0060 10.0kb upstream 10.0kb upstream 10000 false Scaffold3527: 229599-239598 Capsella grandiflora
Cagra.3527s0060 10.0kb downstream 10.0kb downstream 12542 true Scaffold3527: 239599-252140 Capsella grandiflora
Cagra.3527s0060 10.0kb downstream 10.0kb downstream 10000 false Scaffold3527: 242141-252140 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338861 5261 Brassicaceae View MSA
123779388 5264 Brassicales-Malvales View MSA
124348665 5266 SBM View MSA
124245210 5268 Malvidae View MSA
124073936 5270 Rosid View MSA
123744284 5271 Pentapetalae View MSA
122790327 5272 Eudicot View MSA
122051197 5273 Angiosperm View MSA
121349510 5274 Embryophyte View MSA
123427383 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain