Gene : Cagra.3528s0009 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10343:SF51 - SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 Genomic Order:  9
Name:  ? Cagra.3528s0009 Secondary Identifier:  ? PAC:28906447
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3528s0009 0.5kb upstream 0.5kb upstream 2603 true Scaffold3528: 24278-26880 Capsella grandiflora
Cagra.3528s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold3528: 26381-26880 Capsella grandiflora
Cagra.3528s0009 0.5kb downstream 0.5kb downstream 2603 true Scaffold3528: 23778-26380 Capsella grandiflora
Cagra.3528s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold3528: 23778-24277 Capsella grandiflora
Cagra.3528s0009 1.0kb upstream 1.0kb upstream 3103 true Scaffold3528: 24278-27380 Capsella grandiflora
Cagra.3528s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold3528: 26381-27380 Capsella grandiflora
Cagra.3528s0009 1.0kb downstream 1.0kb downstream 3103 true Scaffold3528: 23278-26380 Capsella grandiflora
Cagra.3528s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold3528: 23278-24277 Capsella grandiflora
Cagra.3528s0009 2.0kb upstream 2.0kb upstream 4103 true Scaffold3528: 24278-28380 Capsella grandiflora
Cagra.3528s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold3528: 26381-28380 Capsella grandiflora
Cagra.3528s0009 2.0kb downstream 2.0kb downstream 4103 true Scaffold3528: 22278-26380 Capsella grandiflora
Cagra.3528s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold3528: 22278-24277 Capsella grandiflora
Cagra.3528s0009 5.0kb upstream 5.0kb upstream 7103 true Scaffold3528: 24278-31380 Capsella grandiflora
Cagra.3528s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold3528: 26381-31380 Capsella grandiflora
Cagra.3528s0009 5.0kb downstream 5.0kb downstream 7103 true Scaffold3528: 19278-26380 Capsella grandiflora
Cagra.3528s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold3528: 19278-24277 Capsella grandiflora
Cagra.3528s0009 10.0kb upstream 10.0kb upstream 12103 true Scaffold3528: 24278-36380 Capsella grandiflora
Cagra.3528s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold3528: 26381-36380 Capsella grandiflora
Cagra.3528s0009 10.0kb downstream 10.0kb downstream 12103 true Scaffold3528: 14278-26380 Capsella grandiflora
Cagra.3528s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold3528: 14278-24277 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374168 5261 Brassicaceae View MSA
123830086 5264 Brassicales-Malvales View MSA
124336703 5266 SBM View MSA
124240884 5268 Malvidae View MSA
124063365 5270 Rosid View MSA
123740870 5271 Pentapetalae View MSA
122792277 5272 Eudicot View MSA
122041753 5273 Angiosperm View MSA
121345261 5274 Embryophyte View MSA
123426874 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain