Gene : Cagra.3517s0027 C. grandiflora v1.1
Defline:  (1 of 1) PTHR14503:SF3 - 50S RIBOSOMAL PROTEIN L34, CHLOROPLASTIC Genomic Order:  27
Name:  ? Cagra.3517s0027 Secondary Identifier:  ? PAC:28916908
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3517s0027 0.5kb upstream 0.5kb upstream 2089 true Scaffold3517: 87331-89419 Capsella grandiflora
Cagra.3517s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold3517: 87331-87830 Capsella grandiflora
Cagra.3517s0027 0.5kb downstream 0.5kb downstream 2089 true Scaffold3517: 87831-89919 Capsella grandiflora
Cagra.3517s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold3517: 89420-89919 Capsella grandiflora
Cagra.3517s0027 1.0kb upstream 1.0kb upstream 2589 true Scaffold3517: 86831-89419 Capsella grandiflora
Cagra.3517s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold3517: 86831-87830 Capsella grandiflora
Cagra.3517s0027 1.0kb downstream 1.0kb downstream 2589 true Scaffold3517: 87831-90419 Capsella grandiflora
Cagra.3517s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold3517: 89420-90419 Capsella grandiflora
Cagra.3517s0027 2.0kb upstream 2.0kb upstream 3589 true Scaffold3517: 85831-89419 Capsella grandiflora
Cagra.3517s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold3517: 85831-87830 Capsella grandiflora
Cagra.3517s0027 2.0kb downstream 2.0kb downstream 3589 true Scaffold3517: 87831-91419 Capsella grandiflora
Cagra.3517s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold3517: 89420-91419 Capsella grandiflora
Cagra.3517s0027 5.0kb upstream 5.0kb upstream 6589 true Scaffold3517: 82831-89419 Capsella grandiflora
Cagra.3517s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold3517: 82831-87830 Capsella grandiflora
Cagra.3517s0027 5.0kb downstream 5.0kb downstream 6589 true Scaffold3517: 87831-94419 Capsella grandiflora
Cagra.3517s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold3517: 89420-94419 Capsella grandiflora
Cagra.3517s0027 10.0kb upstream 10.0kb upstream 11589 true Scaffold3517: 77831-89419 Capsella grandiflora
Cagra.3517s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold3517: 77831-87830 Capsella grandiflora
Cagra.3517s0027 10.0kb downstream 10.0kb downstream 11589 true Scaffold3517: 87831-99419 Capsella grandiflora
Cagra.3517s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold3517: 89420-99419 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364923 5261 Brassicaceae View MSA
123827746 5264 Brassicales-Malvales View MSA
124336963 5266 SBM View MSA
124250965 5268 Malvidae View MSA
124063113 5270 Rosid View MSA
123739506 5271 Pentapetalae View MSA
122792806 5272 Eudicot View MSA
122044582 5273 Angiosperm View MSA
121344313 5274 Embryophyte View MSA
123425891 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain