Gene : Cagra.3517s0051 C. grandiflora v1.1
Defline:  (1 of 6) PTHR10906 - SECY/SEC61-ALPHA FAMILY MEMBER Genomic Order:  51
Name:  ? Cagra.3517s0051 Secondary Identifier:  ? PAC:28916926
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3517s0051 0.5kb upstream 0.5kb upstream 3080 true Scaffold3517: 183701-186780 Capsella grandiflora
Cagra.3517s0051 0.5kb upstream 0.5kb upstream 500 false Scaffold3517: 183701-184200 Capsella grandiflora
Cagra.3517s0051 0.5kb downstream 0.5kb downstream 3080 true Scaffold3517: 184201-187280 Capsella grandiflora
Cagra.3517s0051 0.5kb downstream 0.5kb downstream 500 false Scaffold3517: 186781-187280 Capsella grandiflora
Cagra.3517s0051 1.0kb upstream 1.0kb upstream 3580 true Scaffold3517: 183201-186780 Capsella grandiflora
Cagra.3517s0051 1.0kb upstream 1.0kb upstream 1000 false Scaffold3517: 183201-184200 Capsella grandiflora
Cagra.3517s0051 1.0kb downstream 1.0kb downstream 3580 true Scaffold3517: 184201-187780 Capsella grandiflora
Cagra.3517s0051 1.0kb downstream 1.0kb downstream 1000 false Scaffold3517: 186781-187780 Capsella grandiflora
Cagra.3517s0051 2.0kb upstream 2.0kb upstream 4580 true Scaffold3517: 182201-186780 Capsella grandiflora
Cagra.3517s0051 2.0kb upstream 2.0kb upstream 2000 false Scaffold3517: 182201-184200 Capsella grandiflora
Cagra.3517s0051 2.0kb downstream 2.0kb downstream 4580 true Scaffold3517: 184201-188780 Capsella grandiflora
Cagra.3517s0051 2.0kb downstream 2.0kb downstream 2000 false Scaffold3517: 186781-188780 Capsella grandiflora
Cagra.3517s0051 5.0kb upstream 5.0kb upstream 7580 true Scaffold3517: 179201-186780 Capsella grandiflora
Cagra.3517s0051 5.0kb upstream 5.0kb upstream 5000 false Scaffold3517: 179201-184200 Capsella grandiflora
Cagra.3517s0051 5.0kb downstream 5.0kb downstream 7580 true Scaffold3517: 184201-191780 Capsella grandiflora
Cagra.3517s0051 5.0kb downstream 5.0kb downstream 5000 false Scaffold3517: 186781-191780 Capsella grandiflora
Cagra.3517s0051 10.0kb upstream 10.0kb upstream 12580 true Scaffold3517: 174201-186780 Capsella grandiflora
Cagra.3517s0051 10.0kb upstream 10.0kb upstream 10000 false Scaffold3517: 174201-184200 Capsella grandiflora
Cagra.3517s0051 10.0kb downstream 10.0kb downstream 12580 true Scaffold3517: 184201-196780 Capsella grandiflora
Cagra.3517s0051 10.0kb downstream 10.0kb downstream 10000 false Scaffold3517: 186781-196780 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381063 5261 Brassicaceae View MSA
123832597 5264 Brassicales-Malvales View MSA
124347555 5266 SBM View MSA
124244481 5268 Malvidae View MSA
124061120 5270 Rosid View MSA
123743159 5271 Pentapetalae View MSA
122792380 5272 Eudicot View MSA
122043956 5273 Angiosperm View MSA
121349680 5274 Embryophyte View MSA
123426638 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain