Gene : Cagra.3517s0041 C. grandiflora v1.1
Defline:  (1 of 4) PTHR33671:SF3 - F28N24.8 PROTEIN Genomic Order:  41
Name:  ? Cagra.3517s0041 Secondary Identifier:  ? PAC:28916913
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3517s0041 0.5kb upstream 0.5kb upstream 3477 true Scaffold3517: 133970-137446 Capsella grandiflora
Cagra.3517s0041 0.5kb upstream 0.5kb upstream 500 false Scaffold3517: 133970-134469 Capsella grandiflora
Cagra.3517s0041 0.5kb downstream 0.5kb downstream 3477 true Scaffold3517: 134470-137946 Capsella grandiflora
Cagra.3517s0041 0.5kb downstream 0.5kb downstream 500 false Scaffold3517: 137447-137946 Capsella grandiflora
Cagra.3517s0041 1.0kb upstream 1.0kb upstream 3977 true Scaffold3517: 133470-137446 Capsella grandiflora
Cagra.3517s0041 1.0kb upstream 1.0kb upstream 1000 false Scaffold3517: 133470-134469 Capsella grandiflora
Cagra.3517s0041 1.0kb downstream 1.0kb downstream 3977 true Scaffold3517: 134470-138446 Capsella grandiflora
Cagra.3517s0041 1.0kb downstream 1.0kb downstream 1000 false Scaffold3517: 137447-138446 Capsella grandiflora
Cagra.3517s0041 2.0kb upstream 2.0kb upstream 4977 true Scaffold3517: 132470-137446 Capsella grandiflora
Cagra.3517s0041 2.0kb upstream 2.0kb upstream 2000 false Scaffold3517: 132470-134469 Capsella grandiflora
Cagra.3517s0041 2.0kb downstream 2.0kb downstream 4977 true Scaffold3517: 134470-139446 Capsella grandiflora
Cagra.3517s0041 2.0kb downstream 2.0kb downstream 2000 false Scaffold3517: 137447-139446 Capsella grandiflora
Cagra.3517s0041 5.0kb upstream 5.0kb upstream 7977 true Scaffold3517: 129470-137446 Capsella grandiflora
Cagra.3517s0041 5.0kb upstream 5.0kb upstream 5000 false Scaffold3517: 129470-134469 Capsella grandiflora
Cagra.3517s0041 5.0kb downstream 5.0kb downstream 7977 true Scaffold3517: 134470-142446 Capsella grandiflora
Cagra.3517s0041 5.0kb downstream 5.0kb downstream 5000 false Scaffold3517: 137447-142446 Capsella grandiflora
Cagra.3517s0041 10.0kb upstream 10.0kb upstream 12977 true Scaffold3517: 124470-137446 Capsella grandiflora
Cagra.3517s0041 10.0kb upstream 10.0kb upstream 10000 false Scaffold3517: 124470-134469 Capsella grandiflora
Cagra.3517s0041 10.0kb downstream 10.0kb downstream 12977 true Scaffold3517: 134470-147446 Capsella grandiflora
Cagra.3517s0041 10.0kb downstream 10.0kb downstream 10000 false Scaffold3517: 137447-147446 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368097 5261 Brassicaceae View MSA
123838127 5264 Brassicales-Malvales View MSA
124338259 5266 SBM View MSA
124239697 5268 Malvidae View MSA
124068455 5270 Rosid View MSA
123745252 5271 Pentapetalae View MSA
122793682 5272 Eudicot View MSA
122048199 5273 Angiosperm View MSA
121349828 5274 Embryophyte View MSA
123381462 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain