Gene : Cagra.3517s0053 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10585:SF26 - ER LUMEN PROTEIN RETAINING RECEPTOR Genomic Order:  53
Name:  ? Cagra.3517s0053 Secondary Identifier:  ? PAC:28916895
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3517s0053 0.5kb upstream 0.5kb upstream 3786 true Scaffold3517: 190043-193828 Capsella grandiflora
Cagra.3517s0053 0.5kb upstream 0.5kb upstream 500 false Scaffold3517: 193329-193828 Capsella grandiflora
Cagra.3517s0053 0.5kb downstream 0.5kb downstream 3786 true Scaffold3517: 189543-193328 Capsella grandiflora
Cagra.3517s0053 0.5kb downstream 0.5kb downstream 500 false Scaffold3517: 189543-190042 Capsella grandiflora
Cagra.3517s0053 1.0kb upstream 1.0kb upstream 4286 true Scaffold3517: 190043-194328 Capsella grandiflora
Cagra.3517s0053 1.0kb upstream 1.0kb upstream 1000 false Scaffold3517: 193329-194328 Capsella grandiflora
Cagra.3517s0053 1.0kb downstream 1.0kb downstream 4286 true Scaffold3517: 189043-193328 Capsella grandiflora
Cagra.3517s0053 1.0kb downstream 1.0kb downstream 1000 false Scaffold3517: 189043-190042 Capsella grandiflora
Cagra.3517s0053 2.0kb upstream 2.0kb upstream 5286 true Scaffold3517: 190043-195328 Capsella grandiflora
Cagra.3517s0053 2.0kb upstream 2.0kb upstream 2000 false Scaffold3517: 193329-195328 Capsella grandiflora
Cagra.3517s0053 2.0kb downstream 2.0kb downstream 5286 true Scaffold3517: 188043-193328 Capsella grandiflora
Cagra.3517s0053 2.0kb downstream 2.0kb downstream 2000 false Scaffold3517: 188043-190042 Capsella grandiflora
Cagra.3517s0053 5.0kb upstream 5.0kb upstream 8286 true Scaffold3517: 190043-198328 Capsella grandiflora
Cagra.3517s0053 5.0kb upstream 5.0kb upstream 5000 false Scaffold3517: 193329-198328 Capsella grandiflora
Cagra.3517s0053 5.0kb downstream 5.0kb downstream 8286 true Scaffold3517: 185043-193328 Capsella grandiflora
Cagra.3517s0053 5.0kb downstream 5.0kb downstream 5000 false Scaffold3517: 185043-190042 Capsella grandiflora
Cagra.3517s0053 10.0kb upstream 10.0kb upstream 13286 true Scaffold3517: 190043-203328 Capsella grandiflora
Cagra.3517s0053 10.0kb upstream 10.0kb upstream 10000 false Scaffold3517: 193329-203328 Capsella grandiflora
Cagra.3517s0053 10.0kb downstream 10.0kb downstream 13286 true Scaffold3517: 180043-193328 Capsella grandiflora
Cagra.3517s0053 10.0kb downstream 10.0kb downstream 10000 false Scaffold3517: 180043-190042 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378749 5261 Brassicaceae View MSA
123839451 5264 Brassicales-Malvales View MSA
124351450 5266 SBM View MSA
124253206 5268 Malvidae View MSA
124069792 5270 Rosid View MSA
123751554 5271 Pentapetalae View MSA
122794159 5272 Eudicot View MSA
122048237 5273 Angiosperm View MSA
121347107 5274 Embryophyte View MSA
123428809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain