Gene : Cagra.3517s0058 C. grandiflora v1.1
Defline:  (1 of 2) PTHR33596:SF3 - COLD-REGULATED 413 INNER MEMBRANE PROTEIN 1, CHLOROPLASTIC-RELATED Genomic Order:  58
Name:  ? Cagra.3517s0058 Secondary Identifier:  ? PAC:28916915
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3517s0058 0.5kb upstream 0.5kb upstream 1913 true Scaffold3517: 211836-213748 Capsella grandiflora
Cagra.3517s0058 0.5kb upstream 0.5kb upstream 500 false Scaffold3517: 213249-213748 Capsella grandiflora
Cagra.3517s0058 0.5kb downstream 0.5kb downstream 1913 true Scaffold3517: 211336-213248 Capsella grandiflora
Cagra.3517s0058 0.5kb downstream 0.5kb downstream 500 false Scaffold3517: 211336-211835 Capsella grandiflora
Cagra.3517s0058 1.0kb upstream 1.0kb upstream 2413 true Scaffold3517: 211836-214248 Capsella grandiflora
Cagra.3517s0058 1.0kb upstream 1.0kb upstream 1000 false Scaffold3517: 213249-214248 Capsella grandiflora
Cagra.3517s0058 1.0kb downstream 1.0kb downstream 2413 true Scaffold3517: 210836-213248 Capsella grandiflora
Cagra.3517s0058 1.0kb downstream 1.0kb downstream 1000 false Scaffold3517: 210836-211835 Capsella grandiflora
Cagra.3517s0058 2.0kb upstream 2.0kb upstream 3413 true Scaffold3517: 211836-215248 Capsella grandiflora
Cagra.3517s0058 2.0kb upstream 2.0kb upstream 2000 false Scaffold3517: 213249-215248 Capsella grandiflora
Cagra.3517s0058 2.0kb downstream 2.0kb downstream 3413 true Scaffold3517: 209836-213248 Capsella grandiflora
Cagra.3517s0058 2.0kb downstream 2.0kb downstream 2000 false Scaffold3517: 209836-211835 Capsella grandiflora
Cagra.3517s0058 5.0kb upstream 5.0kb upstream 6413 true Scaffold3517: 211836-218248 Capsella grandiflora
Cagra.3517s0058 5.0kb upstream 5.0kb upstream 5000 false Scaffold3517: 213249-218248 Capsella grandiflora
Cagra.3517s0058 5.0kb downstream 5.0kb downstream 6413 true Scaffold3517: 206836-213248 Capsella grandiflora
Cagra.3517s0058 5.0kb downstream 5.0kb downstream 5000 false Scaffold3517: 206836-211835 Capsella grandiflora
Cagra.3517s0058 10.0kb upstream 10.0kb upstream 11413 true Scaffold3517: 211836-223248 Capsella grandiflora
Cagra.3517s0058 10.0kb upstream 10.0kb upstream 10000 false Scaffold3517: 213249-223248 Capsella grandiflora
Cagra.3517s0058 10.0kb downstream 10.0kb downstream 11413 true Scaffold3517: 201836-213248 Capsella grandiflora
Cagra.3517s0058 10.0kb downstream 10.0kb downstream 10000 false Scaffold3517: 201836-211835 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026496 5273 Angiosperm View MSA
122343296 5261 Brassicaceae View MSA
123783539 5264 Brassicales-Malvales View MSA
124346697 5266 SBM View MSA
124242929 5268 Malvidae View MSA
124068573 5270 Rosid View MSA
123739751 5271 Pentapetalae View MSA
122786208 5272 Eudicot View MSA
121350668 5274 Embryophyte View MSA
123381843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain