Gene : Cagra.3519s0013 C. grandiflora v1.1
Defline:  (1 of 5) 3.1.30.1 - Aspergillus nuclease S(1) / Single-stranded-nucleate endonuclease Genomic Order:  13
Name:  ? Cagra.3519s0013 Secondary Identifier:  ? PAC:28893869
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3519s0013 0.5kb upstream 0.5kb upstream 4330 true Scaffold3519: 40112-44441 Capsella grandiflora
Cagra.3519s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold3519: 40112-40611 Capsella grandiflora
Cagra.3519s0013 0.5kb downstream 0.5kb downstream 4330 true Scaffold3519: 40612-44941 Capsella grandiflora
Cagra.3519s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold3519: 44442-44941 Capsella grandiflora
Cagra.3519s0013 1.0kb upstream 1.0kb upstream 4830 true Scaffold3519: 39612-44441 Capsella grandiflora
Cagra.3519s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold3519: 39612-40611 Capsella grandiflora
Cagra.3519s0013 1.0kb downstream 1.0kb downstream 4830 true Scaffold3519: 40612-45441 Capsella grandiflora
Cagra.3519s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold3519: 44442-45441 Capsella grandiflora
Cagra.3519s0013 2.0kb upstream 2.0kb upstream 5830 true Scaffold3519: 38612-44441 Capsella grandiflora
Cagra.3519s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold3519: 38612-40611 Capsella grandiflora
Cagra.3519s0013 2.0kb downstream 2.0kb downstream 5830 true Scaffold3519: 40612-46441 Capsella grandiflora
Cagra.3519s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold3519: 44442-46441 Capsella grandiflora
Cagra.3519s0013 5.0kb upstream 5.0kb upstream 8830 true Scaffold3519: 35612-44441 Capsella grandiflora
Cagra.3519s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold3519: 35612-40611 Capsella grandiflora
Cagra.3519s0013 5.0kb downstream 5.0kb downstream 8830 true Scaffold3519: 40612-49441 Capsella grandiflora
Cagra.3519s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold3519: 44442-49441 Capsella grandiflora
Cagra.3519s0013 10.0kb upstream 10.0kb upstream 13830 true Scaffold3519: 30612-44441 Capsella grandiflora
Cagra.3519s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold3519: 30612-40611 Capsella grandiflora
Cagra.3519s0013 10.0kb downstream 10.0kb downstream 13830 true Scaffold3519: 40612-54441 Capsella grandiflora
Cagra.3519s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold3519: 44442-54441 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026417 5273 Angiosperm View MSA
122333586 5261 Brassicaceae Singleton cluster - no MSA
123841978 5264 Brassicales-Malvales View MSA
124351371 5266 SBM View MSA
124242674 5268 Malvidae View MSA
124066386 5270 Rosid View MSA
123737636 5271 Pentapetalae View MSA
122790228 5272 Eudicot View MSA
121350439 5274 Embryophyte View MSA
123381732 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain