Gene : Cagra.3501s0080 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12899:SF8 - RIBOSOMAL L18P/L5E FAMILY PROTEIN Genomic Order:  80
Name:  ? Cagra.3501s0080 Secondary Identifier:  ? PAC:28902287
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3501s0080 0.5kb upstream 0.5kb upstream 2240 true Scaffold3501: 300475-302714 Capsella grandiflora
Cagra.3501s0080 0.5kb upstream 0.5kb upstream 500 false Scaffold3501: 302215-302714 Capsella grandiflora
Cagra.3501s0080 0.5kb downstream 0.5kb downstream 2240 true Scaffold3501: 299975-302214 Capsella grandiflora
Cagra.3501s0080 0.5kb downstream 0.5kb downstream 500 false Scaffold3501: 299975-300474 Capsella grandiflora
Cagra.3501s0080 1.0kb upstream 1.0kb upstream 2740 true Scaffold3501: 300475-303214 Capsella grandiflora
Cagra.3501s0080 1.0kb upstream 1.0kb upstream 1000 false Scaffold3501: 302215-303214 Capsella grandiflora
Cagra.3501s0080 1.0kb downstream 1.0kb downstream 2740 true Scaffold3501: 299475-302214 Capsella grandiflora
Cagra.3501s0080 1.0kb downstream 1.0kb downstream 1000 false Scaffold3501: 299475-300474 Capsella grandiflora
Cagra.3501s0080 2.0kb upstream 2.0kb upstream 3740 true Scaffold3501: 300475-304214 Capsella grandiflora
Cagra.3501s0080 2.0kb upstream 2.0kb upstream 2000 false Scaffold3501: 302215-304214 Capsella grandiflora
Cagra.3501s0080 2.0kb downstream 2.0kb downstream 3740 true Scaffold3501: 298475-302214 Capsella grandiflora
Cagra.3501s0080 2.0kb downstream 2.0kb downstream 2000 false Scaffold3501: 298475-300474 Capsella grandiflora
Cagra.3501s0080 5.0kb upstream 5.0kb upstream 6740 true Scaffold3501: 300475-307214 Capsella grandiflora
Cagra.3501s0080 5.0kb upstream 5.0kb upstream 5000 false Scaffold3501: 302215-307214 Capsella grandiflora
Cagra.3501s0080 5.0kb downstream 5.0kb downstream 6740 true Scaffold3501: 295475-302214 Capsella grandiflora
Cagra.3501s0080 5.0kb downstream 5.0kb downstream 5000 false Scaffold3501: 295475-300474 Capsella grandiflora
Cagra.3501s0080 10.0kb upstream 10.0kb upstream 11740 true Scaffold3501: 300475-312214 Capsella grandiflora
Cagra.3501s0080 10.0kb upstream 10.0kb upstream 10000 false Scaffold3501: 302215-312214 Capsella grandiflora
Cagra.3501s0080 10.0kb downstream 10.0kb downstream 11740 true Scaffold3501: 290475-302214 Capsella grandiflora
Cagra.3501s0080 10.0kb downstream 10.0kb downstream 10000 false Scaffold3501: 290475-300474 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364969 5261 Brassicaceae View MSA
123834841 5264 Brassicales-Malvales View MSA
124336723 5266 SBM View MSA
124240406 5268 Malvidae View MSA
124068538 5270 Rosid View MSA
123741435 5271 Pentapetalae View MSA
122786788 5272 Eudicot View MSA
122046996 5273 Angiosperm View MSA
121350781 5274 Embryophyte View MSA
123423914 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain