Gene : Cagra.3501s0085 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10288:SF149 - F7A19.25 PROTEIN Genomic Order:  85
Name:  ? Cagra.3501s0085 Secondary Identifier:  ? PAC:28902369
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3501s0085 0.5kb upstream 0.5kb upstream 3183 true Scaffold3501: 310954-314136 Capsella grandiflora
Cagra.3501s0085 0.5kb upstream 0.5kb upstream 500 false Scaffold3501: 310954-311453 Capsella grandiflora
Cagra.3501s0085 0.5kb downstream 0.5kb downstream 3183 true Scaffold3501: 311454-314636 Capsella grandiflora
Cagra.3501s0085 0.5kb downstream 0.5kb downstream 500 false Scaffold3501: 314137-314636 Capsella grandiflora
Cagra.3501s0085 1.0kb upstream 1.0kb upstream 3683 true Scaffold3501: 310454-314136 Capsella grandiflora
Cagra.3501s0085 1.0kb upstream 1.0kb upstream 1000 false Scaffold3501: 310454-311453 Capsella grandiflora
Cagra.3501s0085 1.0kb downstream 1.0kb downstream 3683 true Scaffold3501: 311454-315136 Capsella grandiflora
Cagra.3501s0085 1.0kb downstream 1.0kb downstream 1000 false Scaffold3501: 314137-315136 Capsella grandiflora
Cagra.3501s0085 2.0kb upstream 2.0kb upstream 4683 true Scaffold3501: 309454-314136 Capsella grandiflora
Cagra.3501s0085 2.0kb upstream 2.0kb upstream 2000 false Scaffold3501: 309454-311453 Capsella grandiflora
Cagra.3501s0085 2.0kb downstream 2.0kb downstream 4683 true Scaffold3501: 311454-316136 Capsella grandiflora
Cagra.3501s0085 2.0kb downstream 2.0kb downstream 2000 false Scaffold3501: 314137-316136 Capsella grandiflora
Cagra.3501s0085 5.0kb upstream 5.0kb upstream 7683 true Scaffold3501: 306454-314136 Capsella grandiflora
Cagra.3501s0085 5.0kb upstream 5.0kb upstream 5000 false Scaffold3501: 306454-311453 Capsella grandiflora
Cagra.3501s0085 5.0kb downstream 5.0kb downstream 7683 true Scaffold3501: 311454-319136 Capsella grandiflora
Cagra.3501s0085 5.0kb downstream 5.0kb downstream 5000 false Scaffold3501: 314137-319136 Capsella grandiflora
Cagra.3501s0085 10.0kb upstream 10.0kb upstream 12683 true Scaffold3501: 301454-314136 Capsella grandiflora
Cagra.3501s0085 10.0kb upstream 10.0kb upstream 10000 false Scaffold3501: 301454-311453 Capsella grandiflora
Cagra.3501s0085 10.0kb downstream 10.0kb downstream 12683 true Scaffold3501: 311454-324136 Capsella grandiflora
Cagra.3501s0085 10.0kb downstream 10.0kb downstream 10000 false Scaffold3501: 314137-324136 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041100 5273 Angiosperm View MSA
122379787 5261 Brassicaceae View MSA
123834112 5264 Brassicales-Malvales View MSA
124341634 5266 SBM View MSA
124247819 5268 Malvidae View MSA
124071979 5270 Rosid View MSA
123753315 5271 Pentapetalae View MSA
122789321 5272 Eudicot View MSA
121348372 5274 Embryophyte View MSA
123428845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain