Gene : Cagra.3501s0117 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10992:SF801 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  117
Name:  ? Cagra.3501s0117 Secondary Identifier:  ? PAC:28902236
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora LIPAS-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-7420 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3501s0117 0.5kb upstream 0.5kb upstream 2730 true Scaffold3501: 419453-422182 Capsella grandiflora
Cagra.3501s0117 0.5kb upstream 0.5kb upstream 500 false Scaffold3501: 421683-422182 Capsella grandiflora
Cagra.3501s0117 0.5kb downstream 0.5kb downstream 2730 true Scaffold3501: 418953-421682 Capsella grandiflora
Cagra.3501s0117 0.5kb downstream 0.5kb downstream 500 false Scaffold3501: 418953-419452 Capsella grandiflora
Cagra.3501s0117 1.0kb upstream 1.0kb upstream 3230 true Scaffold3501: 419453-422682 Capsella grandiflora
Cagra.3501s0117 1.0kb upstream 1.0kb upstream 1000 false Scaffold3501: 421683-422682 Capsella grandiflora
Cagra.3501s0117 1.0kb downstream 1.0kb downstream 3230 true Scaffold3501: 418453-421682 Capsella grandiflora
Cagra.3501s0117 1.0kb downstream 1.0kb downstream 1000 false Scaffold3501: 418453-419452 Capsella grandiflora
Cagra.3501s0117 2.0kb upstream 2.0kb upstream 4230 true Scaffold3501: 419453-423682 Capsella grandiflora
Cagra.3501s0117 2.0kb upstream 2.0kb upstream 2000 false Scaffold3501: 421683-423682 Capsella grandiflora
Cagra.3501s0117 2.0kb downstream 2.0kb downstream 4230 true Scaffold3501: 417453-421682 Capsella grandiflora
Cagra.3501s0117 2.0kb downstream 2.0kb downstream 2000 false Scaffold3501: 417453-419452 Capsella grandiflora
Cagra.3501s0117 5.0kb upstream 5.0kb upstream 7230 true Scaffold3501: 419453-426682 Capsella grandiflora
Cagra.3501s0117 5.0kb upstream 5.0kb upstream 5000 false Scaffold3501: 421683-426682 Capsella grandiflora
Cagra.3501s0117 5.0kb downstream 5.0kb downstream 7230 true Scaffold3501: 414453-421682 Capsella grandiflora
Cagra.3501s0117 5.0kb downstream 5.0kb downstream 5000 false Scaffold3501: 414453-419452 Capsella grandiflora
Cagra.3501s0117 10.0kb upstream 10.0kb upstream 12230 true Scaffold3501: 419453-431682 Capsella grandiflora
Cagra.3501s0117 10.0kb upstream 10.0kb upstream 10000 false Scaffold3501: 421683-431682 Capsella grandiflora
Cagra.3501s0117 10.0kb downstream 10.0kb downstream 12230 true Scaffold3501: 409453-421682 Capsella grandiflora
Cagra.3501s0117 10.0kb downstream 10.0kb downstream 10000 false Scaffold3501: 409453-419452 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366509 5261 Brassicaceae View MSA
123838601 5264 Brassicales-Malvales View MSA
124344476 5266 SBM View MSA
124240595 5268 Malvidae View MSA
124072727 5270 Rosid View MSA
123746455 5271 Pentapetalae View MSA
122796232 5272 Eudicot View MSA
122043418 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121348210 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain