Gene : Cagra.3501s0115 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10108:SF817 - METHYLTRANSFERASE PMT4-RELATED Genomic Order:  115
Name:  ? Cagra.3501s0115 Secondary Identifier:  ? PAC:28902350
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3501s0115 0.5kb upstream 0.5kb upstream 4290 true Scaffold3501: 411855-416144 Capsella grandiflora
Cagra.3501s0115 0.5kb upstream 0.5kb upstream 500 false Scaffold3501: 411855-412354 Capsella grandiflora
Cagra.3501s0115 0.5kb downstream 0.5kb downstream 4290 true Scaffold3501: 412355-416644 Capsella grandiflora
Cagra.3501s0115 0.5kb downstream 0.5kb downstream 500 false Scaffold3501: 416145-416644 Capsella grandiflora
Cagra.3501s0115 1.0kb upstream 1.0kb upstream 4790 true Scaffold3501: 411355-416144 Capsella grandiflora
Cagra.3501s0115 1.0kb upstream 1.0kb upstream 1000 false Scaffold3501: 411355-412354 Capsella grandiflora
Cagra.3501s0115 1.0kb downstream 1.0kb downstream 4790 true Scaffold3501: 412355-417144 Capsella grandiflora
Cagra.3501s0115 1.0kb downstream 1.0kb downstream 1000 false Scaffold3501: 416145-417144 Capsella grandiflora
Cagra.3501s0115 2.0kb upstream 2.0kb upstream 5790 true Scaffold3501: 410355-416144 Capsella grandiflora
Cagra.3501s0115 2.0kb upstream 2.0kb upstream 2000 false Scaffold3501: 410355-412354 Capsella grandiflora
Cagra.3501s0115 2.0kb downstream 2.0kb downstream 5790 true Scaffold3501: 412355-418144 Capsella grandiflora
Cagra.3501s0115 2.0kb downstream 2.0kb downstream 2000 false Scaffold3501: 416145-418144 Capsella grandiflora
Cagra.3501s0115 5.0kb upstream 5.0kb upstream 8790 true Scaffold3501: 407355-416144 Capsella grandiflora
Cagra.3501s0115 5.0kb upstream 5.0kb upstream 5000 false Scaffold3501: 407355-412354 Capsella grandiflora
Cagra.3501s0115 5.0kb downstream 5.0kb downstream 8790 true Scaffold3501: 412355-421144 Capsella grandiflora
Cagra.3501s0115 5.0kb downstream 5.0kb downstream 5000 false Scaffold3501: 416145-421144 Capsella grandiflora
Cagra.3501s0115 10.0kb upstream 10.0kb upstream 13790 true Scaffold3501: 402355-416144 Capsella grandiflora
Cagra.3501s0115 10.0kb upstream 10.0kb upstream 10000 false Scaffold3501: 402355-412354 Capsella grandiflora
Cagra.3501s0115 10.0kb downstream 10.0kb downstream 13790 true Scaffold3501: 412355-426144 Capsella grandiflora
Cagra.3501s0115 10.0kb downstream 10.0kb downstream 10000 false Scaffold3501: 416145-426144 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343262 5261 Brassicaceae View MSA
123783513 5264 Brassicales-Malvales View MSA
124281742 5266 SBM View MSA
124249697 5268 Malvidae View MSA
124067932 5270 Rosid View MSA
123753010 5271 Pentapetalae View MSA
122796119 5272 Eudicot View MSA
122048389 5273 Angiosperm View MSA
121346192 5274 Embryophyte View MSA
123380346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain