Gene : Cagra.3501s0118 C. grandiflora v1.1
Defline:  (1 of 2) PF09588 - YqaJ-like viral recombinase domain (YqaJ) Genomic Order:  118
Name:  ? Cagra.3501s0118 Secondary Identifier:  ? PAC:28902293
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3501s0118 0.5kb upstream 0.5kb upstream 1816 true Scaffold3501: 421894-423709 Capsella grandiflora
Cagra.3501s0118 0.5kb upstream 0.5kb upstream 500 false Scaffold3501: 423210-423709 Capsella grandiflora
Cagra.3501s0118 0.5kb downstream 0.5kb downstream 1816 true Scaffold3501: 421394-423209 Capsella grandiflora
Cagra.3501s0118 0.5kb downstream 0.5kb downstream 500 false Scaffold3501: 421394-421893 Capsella grandiflora
Cagra.3501s0118 1.0kb upstream 1.0kb upstream 2316 true Scaffold3501: 421894-424209 Capsella grandiflora
Cagra.3501s0118 1.0kb upstream 1.0kb upstream 1000 false Scaffold3501: 423210-424209 Capsella grandiflora
Cagra.3501s0118 1.0kb downstream 1.0kb downstream 2316 true Scaffold3501: 420894-423209 Capsella grandiflora
Cagra.3501s0118 1.0kb downstream 1.0kb downstream 1000 false Scaffold3501: 420894-421893 Capsella grandiflora
Cagra.3501s0118 2.0kb upstream 2.0kb upstream 3316 true Scaffold3501: 421894-425209 Capsella grandiflora
Cagra.3501s0118 2.0kb upstream 2.0kb upstream 2000 false Scaffold3501: 423210-425209 Capsella grandiflora
Cagra.3501s0118 2.0kb downstream 2.0kb downstream 3316 true Scaffold3501: 419894-423209 Capsella grandiflora
Cagra.3501s0118 2.0kb downstream 2.0kb downstream 2000 false Scaffold3501: 419894-421893 Capsella grandiflora
Cagra.3501s0118 5.0kb upstream 5.0kb upstream 6316 true Scaffold3501: 421894-428209 Capsella grandiflora
Cagra.3501s0118 5.0kb upstream 5.0kb upstream 5000 false Scaffold3501: 423210-428209 Capsella grandiflora
Cagra.3501s0118 5.0kb downstream 5.0kb downstream 6316 true Scaffold3501: 416894-423209 Capsella grandiflora
Cagra.3501s0118 5.0kb downstream 5.0kb downstream 5000 false Scaffold3501: 416894-421893 Capsella grandiflora
Cagra.3501s0118 10.0kb upstream 10.0kb upstream 11316 true Scaffold3501: 421894-433209 Capsella grandiflora
Cagra.3501s0118 10.0kb upstream 10.0kb upstream 10000 false Scaffold3501: 423210-433209 Capsella grandiflora
Cagra.3501s0118 10.0kb downstream 10.0kb downstream 11316 true Scaffold3501: 411894-423209 Capsella grandiflora
Cagra.3501s0118 10.0kb downstream 10.0kb downstream 10000 false Scaffold3501: 411894-421893 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374278 5261 Brassicaceae View MSA
123839933 5264 Brassicales-Malvales View MSA
124338490 5266 SBM View MSA
124237169 5268 Malvidae View MSA
124067156 5270 Rosid View MSA
123738180 5271 Pentapetalae View MSA
122790598 5272 Eudicot View MSA
122045989 5273 Angiosperm View MSA
123429076 5275 Viridiplantae View MSA
121346090 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain