Gene : Cagra.3501s0112 C. grandiflora v1.1
Defline:  (1 of 3) PTHR19305 - SYNAPTOSOMAL ASSOCIATED PROTEIN Genomic Order:  112
Name:  ? Cagra.3501s0112 Secondary Identifier:  ? PAC:28902385
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3501s0112 0.5kb upstream 0.5kb upstream 1864 true Scaffold3501: 406088-407951 Capsella grandiflora
Cagra.3501s0112 0.5kb upstream 0.5kb upstream 500 false Scaffold3501: 407452-407951 Capsella grandiflora
Cagra.3501s0112 0.5kb downstream 0.5kb downstream 1864 true Scaffold3501: 405588-407451 Capsella grandiflora
Cagra.3501s0112 0.5kb downstream 0.5kb downstream 500 false Scaffold3501: 405588-406087 Capsella grandiflora
Cagra.3501s0112 1.0kb upstream 1.0kb upstream 2364 true Scaffold3501: 406088-408451 Capsella grandiflora
Cagra.3501s0112 1.0kb upstream 1.0kb upstream 1000 false Scaffold3501: 407452-408451 Capsella grandiflora
Cagra.3501s0112 1.0kb downstream 1.0kb downstream 2364 true Scaffold3501: 405088-407451 Capsella grandiflora
Cagra.3501s0112 1.0kb downstream 1.0kb downstream 1000 false Scaffold3501: 405088-406087 Capsella grandiflora
Cagra.3501s0112 2.0kb upstream 2.0kb upstream 3364 true Scaffold3501: 406088-409451 Capsella grandiflora
Cagra.3501s0112 2.0kb upstream 2.0kb upstream 2000 false Scaffold3501: 407452-409451 Capsella grandiflora
Cagra.3501s0112 2.0kb downstream 2.0kb downstream 3364 true Scaffold3501: 404088-407451 Capsella grandiflora
Cagra.3501s0112 2.0kb downstream 2.0kb downstream 2000 false Scaffold3501: 404088-406087 Capsella grandiflora
Cagra.3501s0112 5.0kb upstream 5.0kb upstream 6364 true Scaffold3501: 406088-412451 Capsella grandiflora
Cagra.3501s0112 5.0kb upstream 5.0kb upstream 5000 false Scaffold3501: 407452-412451 Capsella grandiflora
Cagra.3501s0112 5.0kb downstream 5.0kb downstream 6364 true Scaffold3501: 401088-407451 Capsella grandiflora
Cagra.3501s0112 5.0kb downstream 5.0kb downstream 5000 false Scaffold3501: 401088-406087 Capsella grandiflora
Cagra.3501s0112 10.0kb upstream 10.0kb upstream 11364 true Scaffold3501: 406088-417451 Capsella grandiflora
Cagra.3501s0112 10.0kb upstream 10.0kb upstream 10000 false Scaffold3501: 407452-417451 Capsella grandiflora
Cagra.3501s0112 10.0kb downstream 10.0kb downstream 11364 true Scaffold3501: 396088-407451 Capsella grandiflora
Cagra.3501s0112 10.0kb downstream 10.0kb downstream 10000 false Scaffold3501: 396088-406087 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366191 5261 Brassicaceae View MSA
123828329 5264 Brassicales-Malvales View MSA
124339659 5266 SBM View MSA
124241975 5268 Malvidae View MSA
124069233 5270 Rosid View MSA
123745951 5271 Pentapetalae View MSA
122796965 5272 Eudicot View MSA
122050570 5273 Angiosperm View MSA
121349451 5274 Embryophyte View MSA
123428314 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain