Gene : Cagra.3501s0128 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13593:SF46 - F21F23.12 PROTEIN Genomic Order:  128
Name:  ? Cagra.3501s0128 Secondary Identifier:  ? PAC:28902343
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora LIPASYN-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-6351 Capsella grandiflora pathologic  
Cgrandiflora PWY-6367 Capsella grandiflora pathologic  
Cgrandiflora PWY-7039 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3501s0128 0.5kb upstream 0.5kb upstream 2374 true Scaffold3501: 460666-463039 Capsella grandiflora
Cagra.3501s0128 0.5kb upstream 0.5kb upstream 500 false Scaffold3501: 462540-463039 Capsella grandiflora
Cagra.3501s0128 0.5kb downstream 0.5kb downstream 2374 true Scaffold3501: 460166-462539 Capsella grandiflora
Cagra.3501s0128 0.5kb downstream 0.5kb downstream 500 false Scaffold3501: 460166-460665 Capsella grandiflora
Cagra.3501s0128 1.0kb upstream 1.0kb upstream 2874 true Scaffold3501: 460666-463539 Capsella grandiflora
Cagra.3501s0128 1.0kb upstream 1.0kb upstream 1000 false Scaffold3501: 462540-463539 Capsella grandiflora
Cagra.3501s0128 1.0kb downstream 1.0kb downstream 2874 true Scaffold3501: 459666-462539 Capsella grandiflora
Cagra.3501s0128 1.0kb downstream 1.0kb downstream 1000 false Scaffold3501: 459666-460665 Capsella grandiflora
Cagra.3501s0128 2.0kb upstream 2.0kb upstream 3874 true Scaffold3501: 460666-464539 Capsella grandiflora
Cagra.3501s0128 2.0kb upstream 2.0kb upstream 2000 false Scaffold3501: 462540-464539 Capsella grandiflora
Cagra.3501s0128 2.0kb downstream 2.0kb downstream 3874 true Scaffold3501: 458666-462539 Capsella grandiflora
Cagra.3501s0128 2.0kb downstream 2.0kb downstream 2000 false Scaffold3501: 458666-460665 Capsella grandiflora
Cagra.3501s0128 5.0kb upstream 5.0kb upstream 6874 true Scaffold3501: 460666-467539 Capsella grandiflora
Cagra.3501s0128 5.0kb upstream 5.0kb upstream 5000 false Scaffold3501: 462540-467539 Capsella grandiflora
Cagra.3501s0128 5.0kb downstream 5.0kb downstream 6874 true Scaffold3501: 455666-462539 Capsella grandiflora
Cagra.3501s0128 5.0kb downstream 5.0kb downstream 5000 false Scaffold3501: 455666-460665 Capsella grandiflora
Cagra.3501s0128 10.0kb upstream 10.0kb upstream 11874 true Scaffold3501: 460666-472539 Capsella grandiflora
Cagra.3501s0128 10.0kb upstream 10.0kb upstream 10000 false Scaffold3501: 462540-472539 Capsella grandiflora
Cagra.3501s0128 10.0kb downstream 10.0kb downstream 11874 true Scaffold3501: 450666-462539 Capsella grandiflora
Cagra.3501s0128 10.0kb downstream 10.0kb downstream 10000 false Scaffold3501: 450666-460665 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376944 5261 Brassicaceae View MSA
123830201 5264 Brassicales-Malvales View MSA
124349669 5266 SBM View MSA
124247999 5268 Malvidae View MSA
124070438 5270 Rosid View MSA
123740952 5271 Pentapetalae View MSA
122794551 5272 Eudicot View MSA
122050722 5273 Angiosperm View MSA
121349197 5274 Embryophyte View MSA
123381212 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain