Gene : Cagra.3501s0134 C. grandiflora v1.1
Defline:  (1 of 3) PTHR15245:SF11 - PHOSPHATIDYLINOSITOL 3-KINASE-RELATED PROTEIN KINASE Genomic Order:  134
Name:  ? Cagra.3501s0134 Secondary Identifier:  ? PAC:28902355
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6351 Capsella grandiflora pathologic  
Cgrandiflora PWY-6352 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3501s0134 0.5kb upstream 0.5kb upstream 3234 true Scaffold3501: 475665-478898 Capsella grandiflora
Cagra.3501s0134 0.5kb upstream 0.5kb upstream 500 false Scaffold3501: 475665-476164 Capsella grandiflora
Cagra.3501s0134 0.5kb downstream 0.5kb downstream 3234 true Scaffold3501: 476165-479398 Capsella grandiflora
Cagra.3501s0134 0.5kb downstream 0.5kb downstream 500 false Scaffold3501: 478899-479398 Capsella grandiflora
Cagra.3501s0134 1.0kb upstream 1.0kb upstream 3734 true Scaffold3501: 475165-478898 Capsella grandiflora
Cagra.3501s0134 1.0kb upstream 1.0kb upstream 1000 false Scaffold3501: 475165-476164 Capsella grandiflora
Cagra.3501s0134 1.0kb downstream 1.0kb downstream 3734 true Scaffold3501: 476165-479898 Capsella grandiflora
Cagra.3501s0134 1.0kb downstream 1.0kb downstream 1000 false Scaffold3501: 478899-479898 Capsella grandiflora
Cagra.3501s0134 2.0kb upstream 2.0kb upstream 4734 true Scaffold3501: 474165-478898 Capsella grandiflora
Cagra.3501s0134 2.0kb upstream 2.0kb upstream 2000 false Scaffold3501: 474165-476164 Capsella grandiflora
Cagra.3501s0134 2.0kb downstream 2.0kb downstream 4734 true Scaffold3501: 476165-480898 Capsella grandiflora
Cagra.3501s0134 2.0kb downstream 2.0kb downstream 2000 false Scaffold3501: 478899-480898 Capsella grandiflora
Cagra.3501s0134 5.0kb upstream 5.0kb upstream 7734 true Scaffold3501: 471165-478898 Capsella grandiflora
Cagra.3501s0134 5.0kb upstream 5.0kb upstream 5000 false Scaffold3501: 471165-476164 Capsella grandiflora
Cagra.3501s0134 5.0kb downstream 5.0kb downstream 7734 true Scaffold3501: 476165-483898 Capsella grandiflora
Cagra.3501s0134 5.0kb downstream 5.0kb downstream 5000 false Scaffold3501: 478899-483898 Capsella grandiflora
Cagra.3501s0134 10.0kb upstream 10.0kb upstream 12734 true Scaffold3501: 466165-478898 Capsella grandiflora
Cagra.3501s0134 10.0kb upstream 10.0kb upstream 10000 false Scaffold3501: 466165-476164 Capsella grandiflora
Cagra.3501s0134 10.0kb downstream 10.0kb downstream 12734 true Scaffold3501: 476165-488898 Capsella grandiflora
Cagra.3501s0134 10.0kb downstream 10.0kb downstream 10000 false Scaffold3501: 478899-488898 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377258 5261 Brassicaceae View MSA
123801484 5264 Brassicales-Malvales View MSA
124298782 5266 SBM View MSA
124150347 5268 Malvidae View MSA
123875977 5270 Rosid View MSA
123459718 5271 Pentapetalae View MSA
122495107 5272 Eudicot View MSA
122050959 5273 Angiosperm View MSA
121351687 5274 Embryophyte View MSA
123427554 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain