Gene : Cagra.3501s0146 C. grandiflora v1.1
Defline:  (1 of 3) PTHR12560:SF13 - LAG1 LONGEVITY ASSURANCE HOMOLOG 1-RELATED Genomic Order:  146
Name:  ? Cagra.3501s0146 Secondary Identifier:  ? PAC:28902321
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3501s0146 0.5kb upstream 0.5kb upstream 2782 true Scaffold3501: 507809-510590 Capsella grandiflora
Cagra.3501s0146 0.5kb upstream 0.5kb upstream 500 false Scaffold3501: 507809-508308 Capsella grandiflora
Cagra.3501s0146 0.5kb downstream 0.5kb downstream 2782 true Scaffold3501: 508309-511090 Capsella grandiflora
Cagra.3501s0146 0.5kb downstream 0.5kb downstream 500 false Scaffold3501: 510591-511090 Capsella grandiflora
Cagra.3501s0146 1.0kb upstream 1.0kb upstream 3282 true Scaffold3501: 507309-510590 Capsella grandiflora
Cagra.3501s0146 1.0kb upstream 1.0kb upstream 1000 false Scaffold3501: 507309-508308 Capsella grandiflora
Cagra.3501s0146 1.0kb downstream 1.0kb downstream 3282 true Scaffold3501: 508309-511590 Capsella grandiflora
Cagra.3501s0146 1.0kb downstream 1.0kb downstream 1000 false Scaffold3501: 510591-511590 Capsella grandiflora
Cagra.3501s0146 2.0kb upstream 2.0kb upstream 4282 true Scaffold3501: 506309-510590 Capsella grandiflora
Cagra.3501s0146 2.0kb upstream 2.0kb upstream 2000 false Scaffold3501: 506309-508308 Capsella grandiflora
Cagra.3501s0146 2.0kb downstream 2.0kb downstream 4282 true Scaffold3501: 508309-512590 Capsella grandiflora
Cagra.3501s0146 2.0kb downstream 2.0kb downstream 2000 false Scaffold3501: 510591-512590 Capsella grandiflora
Cagra.3501s0146 5.0kb upstream 5.0kb upstream 7282 true Scaffold3501: 503309-510590 Capsella grandiflora
Cagra.3501s0146 5.0kb upstream 5.0kb upstream 5000 false Scaffold3501: 503309-508308 Capsella grandiflora
Cagra.3501s0146 5.0kb downstream 5.0kb downstream 7282 true Scaffold3501: 508309-515590 Capsella grandiflora
Cagra.3501s0146 5.0kb downstream 5.0kb downstream 5000 false Scaffold3501: 510591-515590 Capsella grandiflora
Cagra.3501s0146 10.0kb upstream 10.0kb upstream 12282 true Scaffold3501: 498309-510590 Capsella grandiflora
Cagra.3501s0146 10.0kb upstream 10.0kb upstream 10000 false Scaffold3501: 498309-508308 Capsella grandiflora
Cagra.3501s0146 10.0kb downstream 10.0kb downstream 12282 true Scaffold3501: 508309-520590 Capsella grandiflora
Cagra.3501s0146 10.0kb downstream 10.0kb downstream 10000 false Scaffold3501: 510591-520590 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371082 5261 Brassicaceae View MSA
123838645 5264 Brassicales-Malvales View MSA
124347984 5266 SBM View MSA
124254290 5268 Malvidae View MSA
124065846 5270 Rosid View MSA
123739424 5271 Pentapetalae View MSA
122796577 5272 Eudicot View MSA
122046862 5273 Angiosperm View MSA
121348140 5274 Embryophyte View MSA
123428118 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain