Gene : Cagra.3501s0172 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10804:SF68 - METHIONINE AMINOPEPTIDASE 1B, CHLOROPLASTIC Genomic Order:  172
Name:  ? Cagra.3501s0172 Secondary Identifier:  ? PAC:28902309
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3501s0172 0.5kb upstream 0.5kb upstream 3215 true Scaffold3501: 595543-598757 Capsella grandiflora
Cagra.3501s0172 0.5kb upstream 0.5kb upstream 500 false Scaffold3501: 598258-598757 Capsella grandiflora
Cagra.3501s0172 0.5kb downstream 0.5kb downstream 3215 true Scaffold3501: 595043-598257 Capsella grandiflora
Cagra.3501s0172 0.5kb downstream 0.5kb downstream 500 false Scaffold3501: 595043-595542 Capsella grandiflora
Cagra.3501s0172 1.0kb upstream 1.0kb upstream 3715 true Scaffold3501: 595543-599257 Capsella grandiflora
Cagra.3501s0172 1.0kb upstream 1.0kb upstream 1000 false Scaffold3501: 598258-599257 Capsella grandiflora
Cagra.3501s0172 1.0kb downstream 1.0kb downstream 3715 true Scaffold3501: 594543-598257 Capsella grandiflora
Cagra.3501s0172 1.0kb downstream 1.0kb downstream 1000 false Scaffold3501: 594543-595542 Capsella grandiflora
Cagra.3501s0172 2.0kb upstream 2.0kb upstream 4715 true Scaffold3501: 595543-600257 Capsella grandiflora
Cagra.3501s0172 2.0kb upstream 2.0kb upstream 2000 false Scaffold3501: 598258-600257 Capsella grandiflora
Cagra.3501s0172 2.0kb downstream 2.0kb downstream 4715 true Scaffold3501: 593543-598257 Capsella grandiflora
Cagra.3501s0172 2.0kb downstream 2.0kb downstream 2000 false Scaffold3501: 593543-595542 Capsella grandiflora
Cagra.3501s0172 5.0kb upstream 5.0kb upstream 6749 true Scaffold3501: 595543-602291 Capsella grandiflora
Cagra.3501s0172 5.0kb upstream 5.0kb upstream 4034 false Scaffold3501: 598258-602291 Capsella grandiflora
Cagra.3501s0172 5.0kb downstream 5.0kb downstream 7715 true Scaffold3501: 590543-598257 Capsella grandiflora
Cagra.3501s0172 5.0kb downstream 5.0kb downstream 5000 false Scaffold3501: 590543-595542 Capsella grandiflora
Cagra.3501s0172 10.0kb upstream 10.0kb upstream 6749 true Scaffold3501: 595543-602291 Capsella grandiflora
Cagra.3501s0172 10.0kb upstream 10.0kb upstream 4034 false Scaffold3501: 598258-602291 Capsella grandiflora
Cagra.3501s0172 10.0kb downstream 10.0kb downstream 12715 true Scaffold3501: 585543-598257 Capsella grandiflora
Cagra.3501s0172 10.0kb downstream 10.0kb downstream 10000 false Scaffold3501: 585543-595542 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375910 5261 Brassicaceae View MSA
123827434 5264 Brassicales-Malvales View MSA
124338961 5266 SBM View MSA
124242071 5268 Malvidae View MSA
124066750 5270 Rosid View MSA
123749440 5271 Pentapetalae View MSA
122791523 5272 Eudicot View MSA
122046775 5273 Angiosperm View MSA
123429177 5275 Viridiplantae View MSA
121348768 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain