Gene : Cagra.3501s0170 C. grandiflora v1.1
Defline:  (1 of 5) PTHR10593//PTHR10593:SF27 - SERINE/THREONINE-PROTEIN KINASE RIO Genomic Order:  170
Name:  ? Cagra.3501s0170 Secondary Identifier:  ? PAC:28902319
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3501s0170 0.5kb upstream 0.5kb upstream 1800 true Scaffold3501: 590636-592435 Capsella grandiflora
Cagra.3501s0170 0.5kb upstream 0.5kb upstream 500 false Scaffold3501: 590636-591135 Capsella grandiflora
Cagra.3501s0170 0.5kb downstream 0.5kb downstream 1800 true Scaffold3501: 591136-592935 Capsella grandiflora
Cagra.3501s0170 0.5kb downstream 0.5kb downstream 500 false Scaffold3501: 592436-592935 Capsella grandiflora
Cagra.3501s0170 1.0kb upstream 1.0kb upstream 2300 true Scaffold3501: 590136-592435 Capsella grandiflora
Cagra.3501s0170 1.0kb upstream 1.0kb upstream 1000 false Scaffold3501: 590136-591135 Capsella grandiflora
Cagra.3501s0170 1.0kb downstream 1.0kb downstream 2300 true Scaffold3501: 591136-593435 Capsella grandiflora
Cagra.3501s0170 1.0kb downstream 1.0kb downstream 1000 false Scaffold3501: 592436-593435 Capsella grandiflora
Cagra.3501s0170 2.0kb upstream 2.0kb upstream 3300 true Scaffold3501: 589136-592435 Capsella grandiflora
Cagra.3501s0170 2.0kb upstream 2.0kb upstream 2000 false Scaffold3501: 589136-591135 Capsella grandiflora
Cagra.3501s0170 2.0kb downstream 2.0kb downstream 3300 true Scaffold3501: 591136-594435 Capsella grandiflora
Cagra.3501s0170 2.0kb downstream 2.0kb downstream 2000 false Scaffold3501: 592436-594435 Capsella grandiflora
Cagra.3501s0170 5.0kb upstream 5.0kb upstream 6300 true Scaffold3501: 586136-592435 Capsella grandiflora
Cagra.3501s0170 5.0kb upstream 5.0kb upstream 5000 false Scaffold3501: 586136-591135 Capsella grandiflora
Cagra.3501s0170 5.0kb downstream 5.0kb downstream 6300 true Scaffold3501: 591136-597435 Capsella grandiflora
Cagra.3501s0170 5.0kb downstream 5.0kb downstream 5000 false Scaffold3501: 592436-597435 Capsella grandiflora
Cagra.3501s0170 10.0kb upstream 10.0kb upstream 11300 true Scaffold3501: 581136-592435 Capsella grandiflora
Cagra.3501s0170 10.0kb upstream 10.0kb upstream 10000 false Scaffold3501: 581136-591135 Capsella grandiflora
Cagra.3501s0170 10.0kb downstream 10.0kb downstream 11156 true Scaffold3501: 591136-602291 Capsella grandiflora
Cagra.3501s0170 10.0kb downstream 10.0kb downstream 9856 false Scaffold3501: 592436-602291 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371176 5261 Brassicaceae View MSA
123834393 5264 Brassicales-Malvales View MSA
124337484 5266 SBM View MSA
124239787 5268 Malvidae View MSA
124071886 5270 Rosid View MSA
123745517 5271 Pentapetalae View MSA
122795224 5272 Eudicot View MSA
122047966 5273 Angiosperm View MSA
121348294 5274 Embryophyte View MSA
123428588 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain