Gene : Cagra.3467s0053 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24198:SF66 - REGULATORY PROTEIN NPR1-RELATED Genomic Order:  53
Name:  ? Cagra.3467s0053 Secondary Identifier:  ? PAC:28912041
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3467s0053 0.5kb upstream 0.5kb upstream 3110 true Scaffold3467: 161720-164829 Capsella grandiflora
Cagra.3467s0053 0.5kb upstream 0.5kb upstream 500 false Scaffold3467: 161720-162219 Capsella grandiflora
Cagra.3467s0053 0.5kb downstream 0.5kb downstream 3110 true Scaffold3467: 162220-165329 Capsella grandiflora
Cagra.3467s0053 0.5kb downstream 0.5kb downstream 500 false Scaffold3467: 164830-165329 Capsella grandiflora
Cagra.3467s0053 1.0kb upstream 1.0kb upstream 3610 true Scaffold3467: 161220-164829 Capsella grandiflora
Cagra.3467s0053 1.0kb upstream 1.0kb upstream 1000 false Scaffold3467: 161220-162219 Capsella grandiflora
Cagra.3467s0053 1.0kb downstream 1.0kb downstream 3610 true Scaffold3467: 162220-165829 Capsella grandiflora
Cagra.3467s0053 1.0kb downstream 1.0kb downstream 1000 false Scaffold3467: 164830-165829 Capsella grandiflora
Cagra.3467s0053 2.0kb upstream 2.0kb upstream 4610 true Scaffold3467: 160220-164829 Capsella grandiflora
Cagra.3467s0053 2.0kb upstream 2.0kb upstream 2000 false Scaffold3467: 160220-162219 Capsella grandiflora
Cagra.3467s0053 2.0kb downstream 2.0kb downstream 4610 true Scaffold3467: 162220-166829 Capsella grandiflora
Cagra.3467s0053 2.0kb downstream 2.0kb downstream 2000 false Scaffold3467: 164830-166829 Capsella grandiflora
Cagra.3467s0053 5.0kb upstream 5.0kb upstream 7610 true Scaffold3467: 157220-164829 Capsella grandiflora
Cagra.3467s0053 5.0kb upstream 5.0kb upstream 5000 false Scaffold3467: 157220-162219 Capsella grandiflora
Cagra.3467s0053 5.0kb downstream 5.0kb downstream 7610 true Scaffold3467: 162220-169829 Capsella grandiflora
Cagra.3467s0053 5.0kb downstream 5.0kb downstream 5000 false Scaffold3467: 164830-169829 Capsella grandiflora
Cagra.3467s0053 10.0kb upstream 10.0kb upstream 12610 true Scaffold3467: 152220-164829 Capsella grandiflora
Cagra.3467s0053 10.0kb upstream 10.0kb upstream 10000 false Scaffold3467: 152220-162219 Capsella grandiflora
Cagra.3467s0053 10.0kb downstream 10.0kb downstream 12610 true Scaffold3467: 162220-174829 Capsella grandiflora
Cagra.3467s0053 10.0kb downstream 10.0kb downstream 10000 false Scaffold3467: 164830-174829 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360387 5261 Brassicaceae View MSA
123837982 5264 Brassicales-Malvales View MSA
124343293 5266 SBM View MSA
124252182 5268 Malvidae View MSA
124061593 5270 Rosid View MSA
123747921 5271 Pentapetalae View MSA
122786106 5272 Eudicot View MSA
122045658 5273 Angiosperm View MSA
121344043 5274 Embryophyte View MSA
123379964 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain