Gene : Cagra.3501s0001 C. grandiflora v1.1
Defline:  (1 of 8) PTHR31338:SF15 - F17F8.9-RELATED Genomic Order:  1
Name:  ? Cagra.3501s0001 Secondary Identifier:  ? PAC:28902314
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3501s0001 0.5kb upstream 0.5kb upstream 693 true Scaffold3501: 1-693 Capsella grandiflora
Cagra.3501s0001 0.5kb upstream 0.5kb upstream 116 false Scaffold3501: 1-116 Capsella grandiflora
Cagra.3501s0001 0.5kb downstream 0.5kb downstream 1077 true Scaffold3501: 117-1193 Capsella grandiflora
Cagra.3501s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold3501: 694-1193 Capsella grandiflora
Cagra.3501s0001 1.0kb upstream 1.0kb upstream 693 true Scaffold3501: 1-693 Capsella grandiflora
Cagra.3501s0001 1.0kb upstream 1.0kb upstream 116 false Scaffold3501: 1-116 Capsella grandiflora
Cagra.3501s0001 1.0kb downstream 1.0kb downstream 1577 true Scaffold3501: 117-1693 Capsella grandiflora
Cagra.3501s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold3501: 694-1693 Capsella grandiflora
Cagra.3501s0001 2.0kb upstream 2.0kb upstream 693 true Scaffold3501: 1-693 Capsella grandiflora
Cagra.3501s0001 2.0kb upstream 2.0kb upstream 116 false Scaffold3501: 1-116 Capsella grandiflora
Cagra.3501s0001 2.0kb downstream 2.0kb downstream 2577 true Scaffold3501: 117-2693 Capsella grandiflora
Cagra.3501s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold3501: 694-2693 Capsella grandiflora
Cagra.3501s0001 5.0kb upstream 5.0kb upstream 693 true Scaffold3501: 1-693 Capsella grandiflora
Cagra.3501s0001 5.0kb upstream 5.0kb upstream 116 false Scaffold3501: 1-116 Capsella grandiflora
Cagra.3501s0001 5.0kb downstream 5.0kb downstream 5577 true Scaffold3501: 117-5693 Capsella grandiflora
Cagra.3501s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold3501: 694-5693 Capsella grandiflora
Cagra.3501s0001 10.0kb upstream 10.0kb upstream 693 true Scaffold3501: 1-693 Capsella grandiflora
Cagra.3501s0001 10.0kb upstream 10.0kb upstream 116 false Scaffold3501: 1-116 Capsella grandiflora
Cagra.3501s0001 10.0kb downstream 10.0kb downstream 10577 true Scaffold3501: 117-10693 Capsella grandiflora
Cagra.3501s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold3501: 694-10693 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343522 5261 Brassicaceae View MSA
123839083 5264 Brassicales-Malvales View MSA
124350725 5266 SBM View MSA
124254624 5268 Malvidae View MSA
124074728 5270 Rosid View MSA
123752132 5271 Pentapetalae View MSA
122796960 5272 Eudicot View MSA
122046763 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain