Gene : Cagra.3501s0029 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10766//PTHR10766:SF58 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN Genomic Order:  29
Name:  ? Cagra.3501s0029 Secondary Identifier:  ? PAC:28902335
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3501s0029 0.5kb upstream 0.5kb upstream 3443 true Scaffold3501: 102536-105978 Capsella grandiflora
Cagra.3501s0029 0.5kb upstream 0.5kb upstream 500 false Scaffold3501: 105479-105978 Capsella grandiflora
Cagra.3501s0029 0.5kb downstream 0.5kb downstream 3443 true Scaffold3501: 102036-105478 Capsella grandiflora
Cagra.3501s0029 0.5kb downstream 0.5kb downstream 500 false Scaffold3501: 102036-102535 Capsella grandiflora
Cagra.3501s0029 1.0kb upstream 1.0kb upstream 3943 true Scaffold3501: 102536-106478 Capsella grandiflora
Cagra.3501s0029 1.0kb upstream 1.0kb upstream 1000 false Scaffold3501: 105479-106478 Capsella grandiflora
Cagra.3501s0029 1.0kb downstream 1.0kb downstream 3943 true Scaffold3501: 101536-105478 Capsella grandiflora
Cagra.3501s0029 1.0kb downstream 1.0kb downstream 1000 false Scaffold3501: 101536-102535 Capsella grandiflora
Cagra.3501s0029 2.0kb upstream 2.0kb upstream 4943 true Scaffold3501: 102536-107478 Capsella grandiflora
Cagra.3501s0029 2.0kb upstream 2.0kb upstream 2000 false Scaffold3501: 105479-107478 Capsella grandiflora
Cagra.3501s0029 2.0kb downstream 2.0kb downstream 4943 true Scaffold3501: 100536-105478 Capsella grandiflora
Cagra.3501s0029 2.0kb downstream 2.0kb downstream 2000 false Scaffold3501: 100536-102535 Capsella grandiflora
Cagra.3501s0029 5.0kb upstream 5.0kb upstream 7943 true Scaffold3501: 102536-110478 Capsella grandiflora
Cagra.3501s0029 5.0kb upstream 5.0kb upstream 5000 false Scaffold3501: 105479-110478 Capsella grandiflora
Cagra.3501s0029 5.0kb downstream 5.0kb downstream 7943 true Scaffold3501: 97536-105478 Capsella grandiflora
Cagra.3501s0029 5.0kb downstream 5.0kb downstream 5000 false Scaffold3501: 97536-102535 Capsella grandiflora
Cagra.3501s0029 10.0kb upstream 10.0kb upstream 12943 true Scaffold3501: 102536-115478 Capsella grandiflora
Cagra.3501s0029 10.0kb upstream 10.0kb upstream 10000 false Scaffold3501: 105479-115478 Capsella grandiflora
Cagra.3501s0029 10.0kb downstream 10.0kb downstream 12943 true Scaffold3501: 92536-105478 Capsella grandiflora
Cagra.3501s0029 10.0kb downstream 10.0kb downstream 10000 false Scaffold3501: 92536-102535 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379465 5261 Brassicaceae View MSA
123837082 5264 Brassicales-Malvales View MSA
124344667 5266 SBM View MSA
124253929 5268 Malvidae View MSA
124069153 5270 Rosid View MSA
123738097 5271 Pentapetalae View MSA
122788164 5272 Eudicot View MSA
122049966 5273 Angiosperm View MSA
121347784 5274 Embryophyte View MSA
123425763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain