Gene : Cagra.3501s0037 C. grandiflora v1.1
Defline:  (1 of 8) PTHR24015:SF419 - NUCLEOTIDE-DIPHOSPHO-SUGAR TRANSFERASE DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  37
Name:  ? Cagra.3501s0037 Secondary Identifier:  ? PAC:28902361
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3501s0037 0.5kb upstream 0.5kb upstream 2449 true Scaffold3501: 145694-148142 Capsella grandiflora
Cagra.3501s0037 0.5kb upstream 0.5kb upstream 500 false Scaffold3501: 145694-146193 Capsella grandiflora
Cagra.3501s0037 0.5kb downstream 0.5kb downstream 2449 true Scaffold3501: 146194-148642 Capsella grandiflora
Cagra.3501s0037 0.5kb downstream 0.5kb downstream 500 false Scaffold3501: 148143-148642 Capsella grandiflora
Cagra.3501s0037 1.0kb upstream 1.0kb upstream 2949 true Scaffold3501: 145194-148142 Capsella grandiflora
Cagra.3501s0037 1.0kb upstream 1.0kb upstream 1000 false Scaffold3501: 145194-146193 Capsella grandiflora
Cagra.3501s0037 1.0kb downstream 1.0kb downstream 2949 true Scaffold3501: 146194-149142 Capsella grandiflora
Cagra.3501s0037 1.0kb downstream 1.0kb downstream 1000 false Scaffold3501: 148143-149142 Capsella grandiflora
Cagra.3501s0037 2.0kb upstream 2.0kb upstream 3949 true Scaffold3501: 144194-148142 Capsella grandiflora
Cagra.3501s0037 2.0kb upstream 2.0kb upstream 2000 false Scaffold3501: 144194-146193 Capsella grandiflora
Cagra.3501s0037 2.0kb downstream 2.0kb downstream 3949 true Scaffold3501: 146194-150142 Capsella grandiflora
Cagra.3501s0037 2.0kb downstream 2.0kb downstream 2000 false Scaffold3501: 148143-150142 Capsella grandiflora
Cagra.3501s0037 5.0kb upstream 5.0kb upstream 6949 true Scaffold3501: 141194-148142 Capsella grandiflora
Cagra.3501s0037 5.0kb upstream 5.0kb upstream 5000 false Scaffold3501: 141194-146193 Capsella grandiflora
Cagra.3501s0037 5.0kb downstream 5.0kb downstream 6949 true Scaffold3501: 146194-153142 Capsella grandiflora
Cagra.3501s0037 5.0kb downstream 5.0kb downstream 5000 false Scaffold3501: 148143-153142 Capsella grandiflora
Cagra.3501s0037 10.0kb upstream 10.0kb upstream 11949 true Scaffold3501: 136194-148142 Capsella grandiflora
Cagra.3501s0037 10.0kb upstream 10.0kb upstream 10000 false Scaffold3501: 136194-146193 Capsella grandiflora
Cagra.3501s0037 10.0kb downstream 10.0kb downstream 11949 true Scaffold3501: 146194-158142 Capsella grandiflora
Cagra.3501s0037 10.0kb downstream 10.0kb downstream 10000 false Scaffold3501: 148143-158142 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381309 5261 Brassicaceae View MSA
123833407 5264 Brassicales-Malvales View MSA
124351132 5266 SBM View MSA
124239087 5268 Malvidae View MSA
124072504 5270 Rosid View MSA
123743110 5271 Pentapetalae View MSA
122789265 5272 Eudicot View MSA
122042337 5273 Angiosperm View MSA
121347291 5274 Embryophyte View MSA
123428374 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain