Gene : Cagra.3392s0021 C. grandiflora v1.1
Defline:  (1 of 9) PF07797 - Protein of unknown function (DUF1639) (DUF1639) Genomic Order:  21
Name:  ? Cagra.3392s0021 Secondary Identifier:  ? PAC:28897985
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3392s0021 0.5kb upstream 0.5kb upstream 2068 true Scaffold3392: 80770-82837 Capsella grandiflora
Cagra.3392s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold3392: 80770-81269 Capsella grandiflora
Cagra.3392s0021 0.5kb downstream 0.5kb downstream 2068 true Scaffold3392: 81270-83337 Capsella grandiflora
Cagra.3392s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold3392: 82838-83337 Capsella grandiflora
Cagra.3392s0021 1.0kb upstream 1.0kb upstream 2568 true Scaffold3392: 80270-82837 Capsella grandiflora
Cagra.3392s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold3392: 80270-81269 Capsella grandiflora
Cagra.3392s0021 1.0kb downstream 1.0kb downstream 2132 true Scaffold3392: 81270-83401 Capsella grandiflora
Cagra.3392s0021 1.0kb downstream 1.0kb downstream 564 false Scaffold3392: 82838-83401 Capsella grandiflora
Cagra.3392s0021 2.0kb upstream 2.0kb upstream 3568 true Scaffold3392: 79270-82837 Capsella grandiflora
Cagra.3392s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold3392: 79270-81269 Capsella grandiflora
Cagra.3392s0021 2.0kb downstream 2.0kb downstream 2132 true Scaffold3392: 81270-83401 Capsella grandiflora
Cagra.3392s0021 2.0kb downstream 2.0kb downstream 564 false Scaffold3392: 82838-83401 Capsella grandiflora
Cagra.3392s0021 5.0kb upstream 5.0kb upstream 6568 true Scaffold3392: 76270-82837 Capsella grandiflora
Cagra.3392s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold3392: 76270-81269 Capsella grandiflora
Cagra.3392s0021 5.0kb downstream 5.0kb downstream 2132 true Scaffold3392: 81270-83401 Capsella grandiflora
Cagra.3392s0021 5.0kb downstream 5.0kb downstream 564 false Scaffold3392: 82838-83401 Capsella grandiflora
Cagra.3392s0021 10.0kb upstream 10.0kb upstream 11568 true Scaffold3392: 71270-82837 Capsella grandiflora
Cagra.3392s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold3392: 71270-81269 Capsella grandiflora
Cagra.3392s0021 10.0kb downstream 10.0kb downstream 2132 true Scaffold3392: 81270-83401 Capsella grandiflora
Cagra.3392s0021 10.0kb downstream 10.0kb downstream 564 false Scaffold3392: 82838-83401 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377080 5261 Brassicaceae View MSA
123832713 5264 Brassicales-Malvales View MSA
124336844 5266 SBM View MSA
124253644 5268 Malvidae View MSA
124073267 5270 Rosid View MSA
123753733 5271 Pentapetalae View MSA
122792020 5272 Eudicot View MSA
122049023 5273 Angiosperm View MSA
121351496 5274 Embryophyte View MSA
123382191 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain