Gene : Cagra.3418s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24412:SF142 - BTB/POZ DOMAIN-CONTAINING PROTEIN Genomic Order:  3
Name:  ? Cagra.3418s0003 Secondary Identifier:  ? PAC:28905666
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3418s0003 0.5kb upstream 0.5kb upstream 4739 true Scaffold3418: 4981-9719 Capsella grandiflora
Cagra.3418s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold3418: 9220-9719 Capsella grandiflora
Cagra.3418s0003 0.5kb downstream 0.5kb downstream 4739 true Scaffold3418: 4481-9219 Capsella grandiflora
Cagra.3418s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold3418: 4481-4980 Capsella grandiflora
Cagra.3418s0003 1.0kb upstream 1.0kb upstream 5239 true Scaffold3418: 4981-10219 Capsella grandiflora
Cagra.3418s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold3418: 9220-10219 Capsella grandiflora
Cagra.3418s0003 1.0kb downstream 1.0kb downstream 5239 true Scaffold3418: 3981-9219 Capsella grandiflora
Cagra.3418s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold3418: 3981-4980 Capsella grandiflora
Cagra.3418s0003 2.0kb upstream 2.0kb upstream 6239 true Scaffold3418: 4981-11219 Capsella grandiflora
Cagra.3418s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold3418: 9220-11219 Capsella grandiflora
Cagra.3418s0003 2.0kb downstream 2.0kb downstream 6239 true Scaffold3418: 2981-9219 Capsella grandiflora
Cagra.3418s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold3418: 2981-4980 Capsella grandiflora
Cagra.3418s0003 5.0kb upstream 5.0kb upstream 9239 true Scaffold3418: 4981-14219 Capsella grandiflora
Cagra.3418s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold3418: 9220-14219 Capsella grandiflora
Cagra.3418s0003 5.0kb downstream 5.0kb downstream 9219 true Scaffold3418: 1-9219 Capsella grandiflora
Cagra.3418s0003 5.0kb downstream 5.0kb downstream 4980 false Scaffold3418: 1-4980 Capsella grandiflora
Cagra.3418s0003 10.0kb upstream 10.0kb upstream 14239 true Scaffold3418: 4981-19219 Capsella grandiflora
Cagra.3418s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold3418: 9220-19219 Capsella grandiflora
Cagra.3418s0003 10.0kb downstream 10.0kb downstream 9219 true Scaffold3418: 1-9219 Capsella grandiflora
Cagra.3418s0003 10.0kb downstream 10.0kb downstream 4980 false Scaffold3418: 1-4980 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366318 5261 Brassicaceae View MSA
123833332 5264 Brassicales-Malvales View MSA
124337676 5266 SBM View MSA
124238709 5268 Malvidae View MSA
124063490 5270 Rosid View MSA
123739254 5271 Pentapetalae View MSA
122791081 5272 Eudicot View MSA
122042237 5273 Angiosperm View MSA
121345502 5274 Embryophyte View MSA
123426971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain