Gene : Cagra.3434s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23084//PTHR23084:SF136 - PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED Genomic Order:  1
Name:  ? Cagra.3434s0001 Secondary Identifier:  ? PAC:28915047
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6351 Capsella grandiflora pathologic  
Cgrandiflora PWY-6352 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3434s0001 0.5kb upstream 0.5kb upstream 2477 true Scaffold3434: 510-2986 Capsella grandiflora
Cagra.3434s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold3434: 2487-2986 Capsella grandiflora
Cagra.3434s0001 0.5kb downstream 0.5kb downstream 2477 true Scaffold3434: 10-2486 Capsella grandiflora
Cagra.3434s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold3434: 10-509 Capsella grandiflora
Cagra.3434s0001 1.0kb upstream 1.0kb upstream 2977 true Scaffold3434: 510-3486 Capsella grandiflora
Cagra.3434s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold3434: 2487-3486 Capsella grandiflora
Cagra.3434s0001 1.0kb downstream 1.0kb downstream 2486 true Scaffold3434: 1-2486 Capsella grandiflora
Cagra.3434s0001 1.0kb downstream 1.0kb downstream 509 false Scaffold3434: 1-509 Capsella grandiflora
Cagra.3434s0001 2.0kb upstream 2.0kb upstream 3977 true Scaffold3434: 510-4486 Capsella grandiflora
Cagra.3434s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold3434: 2487-4486 Capsella grandiflora
Cagra.3434s0001 2.0kb downstream 2.0kb downstream 2486 true Scaffold3434: 1-2486 Capsella grandiflora
Cagra.3434s0001 2.0kb downstream 2.0kb downstream 509 false Scaffold3434: 1-509 Capsella grandiflora
Cagra.3434s0001 5.0kb upstream 5.0kb upstream 6977 true Scaffold3434: 510-7486 Capsella grandiflora
Cagra.3434s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold3434: 2487-7486 Capsella grandiflora
Cagra.3434s0001 5.0kb downstream 5.0kb downstream 2486 true Scaffold3434: 1-2486 Capsella grandiflora
Cagra.3434s0001 5.0kb downstream 5.0kb downstream 509 false Scaffold3434: 1-509 Capsella grandiflora
Cagra.3434s0001 10.0kb upstream 10.0kb upstream 11977 true Scaffold3434: 510-12486 Capsella grandiflora
Cagra.3434s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold3434: 2487-12486 Capsella grandiflora
Cagra.3434s0001 10.0kb downstream 10.0kb downstream 2486 true Scaffold3434: 1-2486 Capsella grandiflora
Cagra.3434s0001 10.0kb downstream 10.0kb downstream 509 false Scaffold3434: 1-509 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360269 5261 Brassicaceae View MSA
123839023 5264 Brassicales-Malvales View MSA
124337793 5266 SBM View MSA
124241055 5268 Malvidae View MSA
124062192 5270 Rosid View MSA
123740472 5271 Pentapetalae View MSA
122790939 5272 Eudicot View MSA
122046556 5273 Angiosperm View MSA
121350119 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain