Gene : Cagra.3449s0001 C. grandiflora v1.1
Defline:  (1 of 1) KOG2645 - Type I phosphodiesterase/nucleotide pyrophosphatase Genomic Order:  1
Name:  ? Cagra.3449s0001 Secondary Identifier:  ? PAC:28917410
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3449s0001 0.5kb upstream 0.5kb upstream 2161 true Scaffold3449: 635-2795 Capsella grandiflora
Cagra.3449s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold3449: 635-1134 Capsella grandiflora
Cagra.3449s0001 0.5kb downstream 0.5kb downstream 2161 true Scaffold3449: 1135-3295 Capsella grandiflora
Cagra.3449s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold3449: 2796-3295 Capsella grandiflora
Cagra.3449s0001 1.0kb upstream 1.0kb upstream 2661 true Scaffold3449: 135-2795 Capsella grandiflora
Cagra.3449s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold3449: 135-1134 Capsella grandiflora
Cagra.3449s0001 1.0kb downstream 1.0kb downstream 2661 true Scaffold3449: 1135-3795 Capsella grandiflora
Cagra.3449s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold3449: 2796-3795 Capsella grandiflora
Cagra.3449s0001 2.0kb upstream 2.0kb upstream 2795 true Scaffold3449: 1-2795 Capsella grandiflora
Cagra.3449s0001 2.0kb upstream 2.0kb upstream 1134 false Scaffold3449: 1-1134 Capsella grandiflora
Cagra.3449s0001 2.0kb downstream 2.0kb downstream 3661 true Scaffold3449: 1135-4795 Capsella grandiflora
Cagra.3449s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold3449: 2796-4795 Capsella grandiflora
Cagra.3449s0001 5.0kb upstream 5.0kb upstream 2795 true Scaffold3449: 1-2795 Capsella grandiflora
Cagra.3449s0001 5.0kb upstream 5.0kb upstream 1134 false Scaffold3449: 1-1134 Capsella grandiflora
Cagra.3449s0001 5.0kb downstream 5.0kb downstream 6661 true Scaffold3449: 1135-7795 Capsella grandiflora
Cagra.3449s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold3449: 2796-7795 Capsella grandiflora
Cagra.3449s0001 10.0kb upstream 10.0kb upstream 2795 true Scaffold3449: 1-2795 Capsella grandiflora
Cagra.3449s0001 10.0kb upstream 10.0kb upstream 1134 false Scaffold3449: 1-1134 Capsella grandiflora
Cagra.3449s0001 10.0kb downstream 10.0kb downstream 11661 true Scaffold3449: 1135-12795 Capsella grandiflora
Cagra.3449s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold3449: 2796-12795 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122337787 5261 Brassicaceae View MSA
123778419 5264 Brassicales-Malvales View MSA
124276765 5266 SBM View MSA
124132027 5268 Malvidae View MSA
123860364 5270 Rosid View MSA
123749902 5271 Pentapetalae View MSA
122787423 5272 Eudicot View MSA
122045271 5273 Angiosperm View MSA
121350623 5274 Embryophyte View MSA
123425338 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain