Gene : Cagra.3434s0008 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11064:SF20 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6-RELATED Genomic Order:  8
Name:  ? Cagra.3434s0008 Secondary Identifier:  ? PAC:28915051
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3434s0008 0.5kb upstream 0.5kb upstream 2362 true Scaffold3434: 17278-19639 Capsella grandiflora
Cagra.3434s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold3434: 19140-19639 Capsella grandiflora
Cagra.3434s0008 0.5kb downstream 0.5kb downstream 2362 true Scaffold3434: 16778-19139 Capsella grandiflora
Cagra.3434s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold3434: 16778-17277 Capsella grandiflora
Cagra.3434s0008 1.0kb upstream 1.0kb upstream 2862 true Scaffold3434: 17278-20139 Capsella grandiflora
Cagra.3434s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold3434: 19140-20139 Capsella grandiflora
Cagra.3434s0008 1.0kb downstream 1.0kb downstream 2862 true Scaffold3434: 16278-19139 Capsella grandiflora
Cagra.3434s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold3434: 16278-17277 Capsella grandiflora
Cagra.3434s0008 2.0kb upstream 2.0kb upstream 3862 true Scaffold3434: 17278-21139 Capsella grandiflora
Cagra.3434s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold3434: 19140-21139 Capsella grandiflora
Cagra.3434s0008 2.0kb downstream 2.0kb downstream 3862 true Scaffold3434: 15278-19139 Capsella grandiflora
Cagra.3434s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold3434: 15278-17277 Capsella grandiflora
Cagra.3434s0008 5.0kb upstream 5.0kb upstream 6862 true Scaffold3434: 17278-24139 Capsella grandiflora
Cagra.3434s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold3434: 19140-24139 Capsella grandiflora
Cagra.3434s0008 5.0kb downstream 5.0kb downstream 6862 true Scaffold3434: 12278-19139 Capsella grandiflora
Cagra.3434s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold3434: 12278-17277 Capsella grandiflora
Cagra.3434s0008 10.0kb upstream 10.0kb upstream 7127 true Scaffold3434: 17278-24404 Capsella grandiflora
Cagra.3434s0008 10.0kb upstream 10.0kb upstream 5265 false Scaffold3434: 19140-24404 Capsella grandiflora
Cagra.3434s0008 10.0kb downstream 10.0kb downstream 11862 true Scaffold3434: 7278-19139 Capsella grandiflora
Cagra.3434s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold3434: 7278-17277 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377618 5261 Brassicaceae View MSA
123829779 5264 Brassicales-Malvales View MSA
124349168 5266 SBM View MSA
124244500 5268 Malvidae View MSA
124066588 5270 Rosid View MSA
123751737 5271 Pentapetalae View MSA
122797656 5272 Eudicot View MSA
122048596 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain