Gene : Cagra.3467s0010 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10920:SF13 - PRE-RRNA PROCESSING PROTEIN FTSJ3 Genomic Order:  10
Name:  ? Cagra.3467s0010 Secondary Identifier:  ? PAC:28912052
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3467s0010 0.5kb upstream 0.5kb upstream 4613 true Scaffold3467: 25550-30162 Capsella grandiflora
Cagra.3467s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold3467: 29663-30162 Capsella grandiflora
Cagra.3467s0010 0.5kb downstream 0.5kb downstream 4613 true Scaffold3467: 25050-29662 Capsella grandiflora
Cagra.3467s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold3467: 25050-25549 Capsella grandiflora
Cagra.3467s0010 1.0kb upstream 1.0kb upstream 5113 true Scaffold3467: 25550-30662 Capsella grandiflora
Cagra.3467s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold3467: 29663-30662 Capsella grandiflora
Cagra.3467s0010 1.0kb downstream 1.0kb downstream 5113 true Scaffold3467: 24550-29662 Capsella grandiflora
Cagra.3467s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold3467: 24550-25549 Capsella grandiflora
Cagra.3467s0010 2.0kb upstream 2.0kb upstream 6113 true Scaffold3467: 25550-31662 Capsella grandiflora
Cagra.3467s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold3467: 29663-31662 Capsella grandiflora
Cagra.3467s0010 2.0kb downstream 2.0kb downstream 6113 true Scaffold3467: 23550-29662 Capsella grandiflora
Cagra.3467s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold3467: 23550-25549 Capsella grandiflora
Cagra.3467s0010 5.0kb upstream 5.0kb upstream 9113 true Scaffold3467: 25550-34662 Capsella grandiflora
Cagra.3467s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold3467: 29663-34662 Capsella grandiflora
Cagra.3467s0010 5.0kb downstream 5.0kb downstream 9113 true Scaffold3467: 20550-29662 Capsella grandiflora
Cagra.3467s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold3467: 20550-25549 Capsella grandiflora
Cagra.3467s0010 10.0kb upstream 10.0kb upstream 14113 true Scaffold3467: 25550-39662 Capsella grandiflora
Cagra.3467s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold3467: 29663-39662 Capsella grandiflora
Cagra.3467s0010 10.0kb downstream 10.0kb downstream 14113 true Scaffold3467: 15550-29662 Capsella grandiflora
Cagra.3467s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold3467: 15550-25549 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362243 5261 Brassicaceae View MSA
123831880 5264 Brassicales-Malvales View MSA
124339310 5266 SBM View MSA
124242070 5268 Malvidae View MSA
124066192 5270 Rosid View MSA
123747132 5271 Pentapetalae View MSA
122787166 5272 Eudicot View MSA
122043455 5273 Angiosperm View MSA
121347110 5274 Embryophyte View MSA
123425494 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain