Gene : Cagra.3467s0006 C. grandiflora v1.1
Genomic Order:  6 Name:  ? Cagra.3467s0006
Secondary Identifier:  ? PAC:28912039
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3467s0006 0.5kb upstream 0.5kb upstream 1934 true Scaffold3467: 15121-17054 Capsella grandiflora
Cagra.3467s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold3467: 16555-17054 Capsella grandiflora
Cagra.3467s0006 0.5kb downstream 0.5kb downstream 1934 true Scaffold3467: 14621-16554 Capsella grandiflora
Cagra.3467s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold3467: 14621-15120 Capsella grandiflora
Cagra.3467s0006 1.0kb upstream 1.0kb upstream 2434 true Scaffold3467: 15121-17554 Capsella grandiflora
Cagra.3467s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold3467: 16555-17554 Capsella grandiflora
Cagra.3467s0006 1.0kb downstream 1.0kb downstream 2434 true Scaffold3467: 14121-16554 Capsella grandiflora
Cagra.3467s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold3467: 14121-15120 Capsella grandiflora
Cagra.3467s0006 2.0kb upstream 2.0kb upstream 3434 true Scaffold3467: 15121-18554 Capsella grandiflora
Cagra.3467s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold3467: 16555-18554 Capsella grandiflora
Cagra.3467s0006 2.0kb downstream 2.0kb downstream 3434 true Scaffold3467: 13121-16554 Capsella grandiflora
Cagra.3467s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold3467: 13121-15120 Capsella grandiflora
Cagra.3467s0006 5.0kb upstream 5.0kb upstream 6434 true Scaffold3467: 15121-21554 Capsella grandiflora
Cagra.3467s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold3467: 16555-21554 Capsella grandiflora
Cagra.3467s0006 5.0kb downstream 5.0kb downstream 6434 true Scaffold3467: 10121-16554 Capsella grandiflora
Cagra.3467s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold3467: 10121-15120 Capsella grandiflora
Cagra.3467s0006 10.0kb upstream 10.0kb upstream 11434 true Scaffold3467: 15121-26554 Capsella grandiflora
Cagra.3467s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold3467: 16555-26554 Capsella grandiflora
Cagra.3467s0006 10.0kb downstream 10.0kb downstream 11434 true Scaffold3467: 5121-16554 Capsella grandiflora
Cagra.3467s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold3467: 5121-15120 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333562 5261 Brassicaceae Singleton cluster - no MSA
123774496 5264 Brassicales-Malvales Singleton cluster - no MSA
124272932 5266 SBM Singleton cluster - no MSA
124128656 5268 Malvidae Singleton cluster - no MSA
123857328 5270 Rosid Singleton cluster - no MSA
123742190 5271 Pentapetalae View MSA
122791015 5272 Eudicot View MSA
122047689 5273 Angiosperm View MSA
121310779 5274 Embryophyte View MSA
123348183 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain