Gene : Cagra.4138s0041 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24089:SF342 - PROTEIN R07E3.4 Genomic Order:  41
Name:  ? Cagra.4138s0041 Secondary Identifier:  ? PAC:28902015
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4138s0041 0.5kb upstream 0.5kb upstream 2669 true Scaffold4138: 151290-153958 Capsella grandiflora
Cagra.4138s0041 0.5kb upstream 0.5kb upstream 500 false Scaffold4138: 151290-151789 Capsella grandiflora
Cagra.4138s0041 0.5kb downstream 0.5kb downstream 2669 true Scaffold4138: 151790-154458 Capsella grandiflora
Cagra.4138s0041 0.5kb downstream 0.5kb downstream 500 false Scaffold4138: 153959-154458 Capsella grandiflora
Cagra.4138s0041 1.0kb upstream 1.0kb upstream 3169 true Scaffold4138: 150790-153958 Capsella grandiflora
Cagra.4138s0041 1.0kb upstream 1.0kb upstream 1000 false Scaffold4138: 150790-151789 Capsella grandiflora
Cagra.4138s0041 1.0kb downstream 1.0kb downstream 3169 true Scaffold4138: 151790-154958 Capsella grandiflora
Cagra.4138s0041 1.0kb downstream 1.0kb downstream 1000 false Scaffold4138: 153959-154958 Capsella grandiflora
Cagra.4138s0041 2.0kb upstream 2.0kb upstream 4169 true Scaffold4138: 149790-153958 Capsella grandiflora
Cagra.4138s0041 2.0kb upstream 2.0kb upstream 2000 false Scaffold4138: 149790-151789 Capsella grandiflora
Cagra.4138s0041 2.0kb downstream 2.0kb downstream 4169 true Scaffold4138: 151790-155958 Capsella grandiflora
Cagra.4138s0041 2.0kb downstream 2.0kb downstream 2000 false Scaffold4138: 153959-155958 Capsella grandiflora
Cagra.4138s0041 5.0kb upstream 5.0kb upstream 7169 true Scaffold4138: 146790-153958 Capsella grandiflora
Cagra.4138s0041 5.0kb upstream 5.0kb upstream 5000 false Scaffold4138: 146790-151789 Capsella grandiflora
Cagra.4138s0041 5.0kb downstream 5.0kb downstream 7169 true Scaffold4138: 151790-158958 Capsella grandiflora
Cagra.4138s0041 5.0kb downstream 5.0kb downstream 5000 false Scaffold4138: 153959-158958 Capsella grandiflora
Cagra.4138s0041 10.0kb upstream 10.0kb upstream 12169 true Scaffold4138: 141790-153958 Capsella grandiflora
Cagra.4138s0041 10.0kb upstream 10.0kb upstream 10000 false Scaffold4138: 141790-151789 Capsella grandiflora
Cagra.4138s0041 10.0kb downstream 10.0kb downstream 12169 true Scaffold4138: 151790-163958 Capsella grandiflora
Cagra.4138s0041 10.0kb downstream 10.0kb downstream 10000 false Scaffold4138: 153959-163958 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360209 5261 Brassicaceae View MSA
123840937 5264 Brassicales-Malvales View MSA
124340002 5266 SBM View MSA
124242516 5268 Malvidae View MSA
124065765 5270 Rosid View MSA
123737630 5271 Pentapetalae View MSA
122792945 5272 Eudicot View MSA
122042720 5273 Angiosperm View MSA
121346256 5274 Embryophyte View MSA
123427851 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain