Gene : Cagra.4153s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11945:SF156 - MADS-BOX PROTEIN-RELATED Genomic Order:  4
Name:  ? Cagra.4153s0004 Secondary Identifier:  ? PAC:28908555
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4153s0004 0.5kb upstream 0.5kb upstream 3895 true Scaffold4153: 6913-10807 Capsella grandiflora
Cagra.4153s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold4153: 10308-10807 Capsella grandiflora
Cagra.4153s0004 0.5kb downstream 0.5kb downstream 3895 true Scaffold4153: 6413-10307 Capsella grandiflora
Cagra.4153s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold4153: 6413-6912 Capsella grandiflora
Cagra.4153s0004 1.0kb upstream 1.0kb upstream 4395 true Scaffold4153: 6913-11307 Capsella grandiflora
Cagra.4153s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold4153: 10308-11307 Capsella grandiflora
Cagra.4153s0004 1.0kb downstream 1.0kb downstream 4395 true Scaffold4153: 5913-10307 Capsella grandiflora
Cagra.4153s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold4153: 5913-6912 Capsella grandiflora
Cagra.4153s0004 2.0kb upstream 2.0kb upstream 5395 true Scaffold4153: 6913-12307 Capsella grandiflora
Cagra.4153s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold4153: 10308-12307 Capsella grandiflora
Cagra.4153s0004 2.0kb downstream 2.0kb downstream 5395 true Scaffold4153: 4913-10307 Capsella grandiflora
Cagra.4153s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold4153: 4913-6912 Capsella grandiflora
Cagra.4153s0004 5.0kb upstream 5.0kb upstream 8395 true Scaffold4153: 6913-15307 Capsella grandiflora
Cagra.4153s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold4153: 10308-15307 Capsella grandiflora
Cagra.4153s0004 5.0kb downstream 5.0kb downstream 8395 true Scaffold4153: 1913-10307 Capsella grandiflora
Cagra.4153s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold4153: 1913-6912 Capsella grandiflora
Cagra.4153s0004 10.0kb upstream 10.0kb upstream 13395 true Scaffold4153: 6913-20307 Capsella grandiflora
Cagra.4153s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold4153: 10308-20307 Capsella grandiflora
Cagra.4153s0004 10.0kb downstream 10.0kb downstream 10307 true Scaffold4153: 1-10307 Capsella grandiflora
Cagra.4153s0004 10.0kb downstream 10.0kb downstream 6912 false Scaffold4153: 1-6912 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365695 5261 Brassicaceae View MSA
123827754 5264 Brassicales-Malvales View MSA
124351043 5266 SBM View MSA
124244447 5268 Malvidae View MSA
124062317 5270 Rosid View MSA
123742642 5271 Pentapetalae View MSA
122791202 5272 Eudicot View MSA
122050633 5273 Angiosperm View MSA
121350455 5274 Embryophyte View MSA
123427239 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain