Gene : Cagra.4169s0011 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10694:SF41 - JUMONJI DOMAIN-CONTAINING PROTEIN 18-RELATED Genomic Order:  11
Name:  ? Cagra.4169s0011 Secondary Identifier:  ? PAC:28906641
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4169s0011 0.5kb upstream 0.5kb upstream 5392 true Scaffold4169: 35840-41231 Capsella grandiflora
Cagra.4169s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold4169: 35840-36339 Capsella grandiflora
Cagra.4169s0011 0.5kb downstream 0.5kb downstream 5392 true Scaffold4169: 36340-41731 Capsella grandiflora
Cagra.4169s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold4169: 41232-41731 Capsella grandiflora
Cagra.4169s0011 1.0kb upstream 1.0kb upstream 5892 true Scaffold4169: 35340-41231 Capsella grandiflora
Cagra.4169s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold4169: 35340-36339 Capsella grandiflora
Cagra.4169s0011 1.0kb downstream 1.0kb downstream 5892 true Scaffold4169: 36340-42231 Capsella grandiflora
Cagra.4169s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold4169: 41232-42231 Capsella grandiflora
Cagra.4169s0011 2.0kb upstream 2.0kb upstream 6892 true Scaffold4169: 34340-41231 Capsella grandiflora
Cagra.4169s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold4169: 34340-36339 Capsella grandiflora
Cagra.4169s0011 2.0kb downstream 2.0kb downstream 6892 true Scaffold4169: 36340-43231 Capsella grandiflora
Cagra.4169s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold4169: 41232-43231 Capsella grandiflora
Cagra.4169s0011 5.0kb upstream 5.0kb upstream 9892 true Scaffold4169: 31340-41231 Capsella grandiflora
Cagra.4169s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold4169: 31340-36339 Capsella grandiflora
Cagra.4169s0011 5.0kb downstream 5.0kb downstream 9892 true Scaffold4169: 36340-46231 Capsella grandiflora
Cagra.4169s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold4169: 41232-46231 Capsella grandiflora
Cagra.4169s0011 10.0kb upstream 10.0kb upstream 14892 true Scaffold4169: 26340-41231 Capsella grandiflora
Cagra.4169s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold4169: 26340-36339 Capsella grandiflora
Cagra.4169s0011 10.0kb downstream 10.0kb downstream 14892 true Scaffold4169: 36340-51231 Capsella grandiflora
Cagra.4169s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold4169: 41232-51231 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366040 5261 Brassicaceae View MSA
123838081 5264 Brassicales-Malvales View MSA
124345494 5266 SBM View MSA
124251575 5268 Malvidae View MSA
124068572 5270 Rosid View MSA
123751211 5271 Pentapetalae View MSA
122797514 5272 Eudicot View MSA
122050637 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121350129 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain