Gene : Cagra.4093s0031 C. grandiflora v1.1
Defline:  (1 of 2) 1.4.4.2 - Glycine dehydrogenase (aminomethyl-transferring) / Glycine-cleavage complex P-protein Genomic Order:  31
Name:  ? Cagra.4093s0031 Secondary Identifier:  ? PAC:28897234
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora GLYCINE-SYN2-PWY Capsella grandiflora pathologic  
Cgrandiflora GLYCLEAV-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4093s0031 0.5kb upstream 0.5kb upstream 5205 true Scaffold4093: 141340-146544 Capsella grandiflora
Cagra.4093s0031 0.5kb upstream 0.5kb upstream 500 false Scaffold4093: 146045-146544 Capsella grandiflora
Cagra.4093s0031 0.5kb downstream 0.5kb downstream 5205 true Scaffold4093: 140840-146044 Capsella grandiflora
Cagra.4093s0031 0.5kb downstream 0.5kb downstream 500 false Scaffold4093: 140840-141339 Capsella grandiflora
Cagra.4093s0031 1.0kb upstream 1.0kb upstream 5705 true Scaffold4093: 141340-147044 Capsella grandiflora
Cagra.4093s0031 1.0kb upstream 1.0kb upstream 1000 false Scaffold4093: 146045-147044 Capsella grandiflora
Cagra.4093s0031 1.0kb downstream 1.0kb downstream 5705 true Scaffold4093: 140340-146044 Capsella grandiflora
Cagra.4093s0031 1.0kb downstream 1.0kb downstream 1000 false Scaffold4093: 140340-141339 Capsella grandiflora
Cagra.4093s0031 2.0kb upstream 2.0kb upstream 6705 true Scaffold4093: 141340-148044 Capsella grandiflora
Cagra.4093s0031 2.0kb upstream 2.0kb upstream 2000 false Scaffold4093: 146045-148044 Capsella grandiflora
Cagra.4093s0031 2.0kb downstream 2.0kb downstream 6705 true Scaffold4093: 139340-146044 Capsella grandiflora
Cagra.4093s0031 2.0kb downstream 2.0kb downstream 2000 false Scaffold4093: 139340-141339 Capsella grandiflora
Cagra.4093s0031 5.0kb upstream 5.0kb upstream 9705 true Scaffold4093: 141340-151044 Capsella grandiflora
Cagra.4093s0031 5.0kb upstream 5.0kb upstream 5000 false Scaffold4093: 146045-151044 Capsella grandiflora
Cagra.4093s0031 5.0kb downstream 5.0kb downstream 9705 true Scaffold4093: 136340-146044 Capsella grandiflora
Cagra.4093s0031 5.0kb downstream 5.0kb downstream 5000 false Scaffold4093: 136340-141339 Capsella grandiflora
Cagra.4093s0031 10.0kb upstream 10.0kb upstream 14705 true Scaffold4093: 141340-156044 Capsella grandiflora
Cagra.4093s0031 10.0kb upstream 10.0kb upstream 10000 false Scaffold4093: 146045-156044 Capsella grandiflora
Cagra.4093s0031 10.0kb downstream 10.0kb downstream 14705 true Scaffold4093: 131340-146044 Capsella grandiflora
Cagra.4093s0031 10.0kb downstream 10.0kb downstream 10000 false Scaffold4093: 131340-141339 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371110 5261 Brassicaceae View MSA
123828979 5264 Brassicales-Malvales View MSA
124346734 5266 SBM View MSA
124253029 5268 Malvidae View MSA
124061980 5270 Rosid View MSA
123750406 5271 Pentapetalae View MSA
122792925 5272 Eudicot View MSA
122042189 5273 Angiosperm View MSA
121346378 5274 Embryophyte View MSA
123424003 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain