Gene : Cagra.4122s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR19139:SF99 - AQUAPORIN TIP2-1 Genomic Order:  5
Name:  ? Cagra.4122s0005 Secondary Identifier:  ? PAC:28914764
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4122s0005 0.5kb upstream 0.5kb upstream 1670 true Scaffold4122: 18545-20214 Capsella grandiflora
Cagra.4122s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold4122: 19715-20214 Capsella grandiflora
Cagra.4122s0005 0.5kb downstream 0.5kb downstream 1670 true Scaffold4122: 18045-19714 Capsella grandiflora
Cagra.4122s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold4122: 18045-18544 Capsella grandiflora
Cagra.4122s0005 1.0kb upstream 1.0kb upstream 2170 true Scaffold4122: 18545-20714 Capsella grandiflora
Cagra.4122s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold4122: 19715-20714 Capsella grandiflora
Cagra.4122s0005 1.0kb downstream 1.0kb downstream 2170 true Scaffold4122: 17545-19714 Capsella grandiflora
Cagra.4122s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold4122: 17545-18544 Capsella grandiflora
Cagra.4122s0005 2.0kb upstream 2.0kb upstream 3170 true Scaffold4122: 18545-21714 Capsella grandiflora
Cagra.4122s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold4122: 19715-21714 Capsella grandiflora
Cagra.4122s0005 2.0kb downstream 2.0kb downstream 3170 true Scaffold4122: 16545-19714 Capsella grandiflora
Cagra.4122s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold4122: 16545-18544 Capsella grandiflora
Cagra.4122s0005 5.0kb upstream 5.0kb upstream 6170 true Scaffold4122: 18545-24714 Capsella grandiflora
Cagra.4122s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold4122: 19715-24714 Capsella grandiflora
Cagra.4122s0005 5.0kb downstream 5.0kb downstream 6170 true Scaffold4122: 13545-19714 Capsella grandiflora
Cagra.4122s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold4122: 13545-18544 Capsella grandiflora
Cagra.4122s0005 10.0kb upstream 10.0kb upstream 11170 true Scaffold4122: 18545-29714 Capsella grandiflora
Cagra.4122s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold4122: 19715-29714 Capsella grandiflora
Cagra.4122s0005 10.0kb downstream 10.0kb downstream 11170 true Scaffold4122: 8545-19714 Capsella grandiflora
Cagra.4122s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold4122: 8545-18544 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380501 5261 Brassicaceae View MSA
123840512 5264 Brassicales-Malvales View MSA
124342076 5266 SBM View MSA
124253497 5268 Malvidae View MSA
124068633 5270 Rosid View MSA
123744142 5271 Pentapetalae View MSA
122790430 5272 Eudicot View MSA
122045007 5273 Angiosperm View MSA
121351438 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain