Gene : Cagra.4082s0018 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10032:SF215 - TRIHELIX TRANSCRIPTION FACTOR GT-3A-RELATED Genomic Order:  18
Name:  ? Cagra.4082s0018 Secondary Identifier:  ? PAC:28896811
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4082s0018 0.5kb upstream 0.5kb upstream 2274 true Scaffold4082: 72619-74892 Capsella grandiflora
Cagra.4082s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold4082: 74393-74892 Capsella grandiflora
Cagra.4082s0018 0.5kb downstream 0.5kb downstream 2274 true Scaffold4082: 72119-74392 Capsella grandiflora
Cagra.4082s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold4082: 72119-72618 Capsella grandiflora
Cagra.4082s0018 1.0kb upstream 1.0kb upstream 2774 true Scaffold4082: 72619-75392 Capsella grandiflora
Cagra.4082s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold4082: 74393-75392 Capsella grandiflora
Cagra.4082s0018 1.0kb downstream 1.0kb downstream 2774 true Scaffold4082: 71619-74392 Capsella grandiflora
Cagra.4082s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold4082: 71619-72618 Capsella grandiflora
Cagra.4082s0018 2.0kb upstream 2.0kb upstream 3774 true Scaffold4082: 72619-76392 Capsella grandiflora
Cagra.4082s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold4082: 74393-76392 Capsella grandiflora
Cagra.4082s0018 2.0kb downstream 2.0kb downstream 3774 true Scaffold4082: 70619-74392 Capsella grandiflora
Cagra.4082s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold4082: 70619-72618 Capsella grandiflora
Cagra.4082s0018 5.0kb upstream 5.0kb upstream 6774 true Scaffold4082: 72619-79392 Capsella grandiflora
Cagra.4082s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold4082: 74393-79392 Capsella grandiflora
Cagra.4082s0018 5.0kb downstream 5.0kb downstream 6774 true Scaffold4082: 67619-74392 Capsella grandiflora
Cagra.4082s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold4082: 67619-72618 Capsella grandiflora
Cagra.4082s0018 10.0kb upstream 10.0kb upstream 11774 true Scaffold4082: 72619-84392 Capsella grandiflora
Cagra.4082s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold4082: 74393-84392 Capsella grandiflora
Cagra.4082s0018 10.0kb downstream 10.0kb downstream 11774 true Scaffold4082: 62619-74392 Capsella grandiflora
Cagra.4082s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold4082: 62619-72618 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361752 5261 Brassicaceae View MSA
123838555 5264 Brassicales-Malvales View MSA
124337533 5266 SBM View MSA
124254329 5268 Malvidae View MSA
124061042 5270 Rosid View MSA
123753444 5271 Pentapetalae View MSA
122785862 5272 Eudicot View MSA
122041695 5273 Angiosperm View MSA
121348900 5274 Embryophyte View MSA
123381067 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain